Protein Model on 7vpp_C_1_L_1 (TEMPLATE: 7vpp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(AMPN_HUMAN) C 1 (C) polymer(polypeptide(L)) [898 aa] Aminopeptidase :K7GMF9_PIG
2 b L 1 (L) branched(oligosaccharide) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose 433D 624L(I) 625N 656I (identity: 75.0 %/79.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7vpp_C_1 identity=79.4%
queryA        65:LDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVV: 164
                :***** ******* ** **** **********  *** *** * *** * * **************  *** ******* ** * ** ***** ******:
7vpp_C_1       4:LDQSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFICQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVV: 102
SecStr          :  TTSGGGSSS  SSEEEEEEEEEEEE  S  TTS  EEEEEEEEEEEESS  SEEEEE  S EE - SSSSSEEEESSS     EEEEEEETTTTEEEE:    
ExpBur          :eeeeeebbeeebeebbebebbebebbbebeeeeeeebbbebebebebebeeebebbbbbbeebebe-beeebbebeeeeebeebebeebeebeebbbbbb:    

queryA       165:HLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNW: 264
                :******     *** *** ******************** ** ******  **************** ********  ******* *** **** *****:
7vpp_C_1     103:HLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNW: 202
SecStr          :EESS   TT EEEEEEEEEEE  SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B   TT  BEEEEEEEEETTSEEEESS BSSS EEETTEEEE:    
ExpBur          :bbeeebeeeeebebbbbbebebbeebbbbbbbebebeeeeebbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbbeeeeeeebeeeeeb:    

queryA       265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364
                : **** *** ******* *****  *   * *********** *** *** ************** ** *********** *******************:
7vpp_C_1     203:SVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTPYPLPKSDQIALPDFNAGAMENWGLVTYRE: 302
SecStr          :EEEEB    SB GGG  EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTT    SSEEEEEEESS SSSEE  TTEEEEEG:    
ExpBur          :bbbebeebbebbbbbbbbbbbebeeeeeebeeebebbbbbbbebbeeebbebbbebbbebbbbbbebbebebebebbbbbbbbbbeeebbbbbbbbbbbb:    

queryA       365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464
                :* ***** *** ************************  ********************* ********** *  ***************** *** * **:
7vpp_C_1     303:NALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNT: 402
SecStr          :GGT   TTT  HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGHHHHTHHHHHHHHTSTT   SS  GGG  S:    
ExpBur          :bbbbbbeeebbbebebebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeeebeebebeebbbbebbbebbeebbbbebbbbbbeeeebbe:    
Contact         :                                                                    b                               

queryA       465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQ: 563
                :****** ** ********* **** ** ** ** ******* ****** ** ** *** **    ** ** *** ** *************** **  **:
7vpp_C_1     403:PAQISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQ: 502
SecStr          :HHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHHHHHHT SSS  SS HHHHHHHHHSS S EEEEEETTTTEEEE:    
ExpBur          :eeebebbeebbbebbbbbbbbbbbebbeeebbeebbbebbeebeeeebebeebbebbbebbeeeeeeebeeebebbbbbbbebbbbbbbebebeebebeb:    

queryA       564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQII: 662
                : *****  ***** * * * ***** **  *  *  *** **  ****** *    ***** *****  ***** *** ** ***   * ******** *:
7vpp_C_1     503:KHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNINVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVI: 602
SecStr          :EE  SSSS    S  TTTT   EEE EEETTEE   EEE S SEEE GGG   SS  EEESGGG SS EEEE HHHHHHHHHHHTT GGGS HHHHHHHH:    
ExpBur          :ebbbbeeebeeeeeeeeebbbbbbbbbbeeeeebeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeeeeebeebbbbbbb:    
Contact         :                                                             bb                              b      

queryA       663:NDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACS: 762
                : * **** ** ******* *****  *  **** ********* ************* ** *** *** **   * ** * ********** ********:
7vpp_C_1     603:YDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACS: 702
SecStr          :HHHHHHHHTTSS HHHHHGGGGGGGG   HHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbbeebebebbbebbbbbeebeebbbbebbbebbebbebbbbeeebeeebeebbeebbeebbeebbeebeebeebbeebbebbbbbbbbebbbe:    

queryA       763:NGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATST: 862
                :** * **     ** ***  * *********** *********   ***** *   * ********* ***** * * ***** ****************:
7vpp_C_1     703:NGLPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATST: 802
SecStr          :TT HHHHHHHHHHHHHHHH TTS  S GGGHHHHHHHHHHHS HHHHHHHHHHHTT SSHHHHHHHHHHGGG S HHHHHHHHHHTT TTTS GGGHHHH:    
ExpBur          :bebeebeebbeebbeebeeeeeeeebebbbbebbbebbbeeeeeebbebbbeebeeeebebbbebbbebbbbbeeeebbeebbeebeeeeebeebbbbeb:    

queryA       863:IISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWF: 962
                :* **  ***** * ************ **     ******* ****** * ********** *   ******************************* **:
7vpp_C_1     803:INSIASNVIGQPLAWDFVQSNWKKLFQDYXXXXXSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWF: 902
SecStr          :HHHHHHSTTHHHHHHHHHHHSHHHHHTT ----- HHHHHHHHHTT  SHHHHHHHHHHHHTTTTT  GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbebbebeebbebbbebbeeebeebeeee-----ebeebbebbbebbbeeebbeebeebeeebeeeebeebeebbebbbbebebbbebbeebeeebbebb:    

queryA       963:TE: 964
                : *:
7vpp_C_1     903:IE: 904
SecStr          :HS:    
ExpBur          :ee:

Input Residue Numbers for Focused Sites

ex) 2,15,123