[pdbjlvh2]Protein Model on 7mwc_C

Protein Model on 7mwc_C_1 (TEMPLATE: 7mwc )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(AMPN_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [399 aa]	Endoplasmic reticulum aminopeptidase 1,LPF sequence :ERAP1_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7mwc_C_1 identity=27.3%

queryA       548:GFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQT: 644
                :*** **  *  *      ***                * * ** * *          *        *      **   *    *** * *    *     :
7mwc_C_1       1:GFPLITI-TVRGRNVHMKQEH----XXXXXXXXXXXXYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDSLTG:  94
SecStr          :   EEEE-EESSSEEEEEEE ----------------    EEE  EESS  S   EEE SSE-EEEE SS  S EE  BS SS  EEE HHHHHHHHHH:    
ExpBur          :eebbbbb-beebeebebebee----------------eeebbebebebeeeeeeeeeebeeee-eeeebeeeeebbbbebeeeeebbbbbeeebbeebbe:    

queryA       645:QLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWR: 741
                : *   * *     **  ** ** * *  *     **   * *  *   **    *  *    ***   *  **    *  *      *          * :
7mwc_C_1      95:LLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQTWT: 189
SecStr          :HHHHHTTTS HHHHHHHHHHHHHHHHHTSS HHHHHHHHTTGGG   HHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHTTTT-----TT  SS:    
ExpBur          :bbeeebeebebeebbebbbbbbebbeeeebebebbbebbbbbeebeebebbbbbbebbbebbebbbbeebeebbeebbebbbebbeebb-----eebebe:    

queryA       742:EIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWIL: 841
                :                  **      *     * *  * *   *          *   *      * ***            *      **        *:
7mwc_C_1     190:D-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFXXXSTEKSQIEFALCRTQNKEKL: 286
SecStr          :S- S HHHHHHHHHHHHHHTTTT HHHHHHHHHHHHHHHTTTS S   TTTHHHHH--HHHTSSHHHHHHHHHHHT --- HHHHHHHHHHHS S HHHH:    
ExpBur          :e-eeeeeeeebbbebbbbbbeeeeeebbeebeeebeebeeeebeeebeebbbebbb--bbbbeeeebbebbbeebee---eeeeebbbebbbbbeeeeeb:    

queryA       842:NRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQAL: 941
                :   *      * *  *        *  *  *  * * *   ** **      ** *        *  ***   *     *     *    *  *   *  :
7mwc_C_1     287:QWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--XSQLRCVQQTI: 384
SecStr          :HHHHHHHHHTSSS GGGHHHHHHHHHHSTTTHHHHHHHHHHS HHHHHHH TT HHHHHHHHHHHTT   HHHHHHHHHHHH SS  ---   HHHHHHH:    
ExpBur          :eebbebbeebeebebeebbebbbebbebeebbebbbebbeeebeebbeeeeeeeeebeebbebbbebbbeeeebeebeebbeebeee---eebebbebbb:    

queryA       942:EKTKANIKWVKENKEVVLQWF: 962
                :*    ** *   *      * :
7mwc_C_1     385:ETIEENIGWMDKNFDKIRVWL: 405
SecStr          :HHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeebbebbeebbeebeebb:

Protein Model on 7mwc_C_1 (TEMPLATE: 7mwc )

Input Residue Numbers for Focused Sites