[pdbjlvh2]Protein Model on 5lg6_A_1_D

Protein Model on 5lg6_A_1_D_1 (TEMPLATE: 5lg6 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [889 aa]	Aminopeptidase N :AMPN_PIG
2	b		D 1 (A)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	84S 86R(N) 110R 234N 271T (identity: 80.0 %/78.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5lg6_A_1 identity=78.5%

queryA        64:TLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLV: 163
                :****** ******* ** **** **********  *** *** * *** * * **************      ******* ** * ** ***** *****:
5lg6_A_1      42:TLDQSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFICQEPTDVIIIHSKKLNYTXXX-XUVVLRGVGDSQVPEIDRTELVELTEYLV: 140
SecStr          :   TTSGGGSSS  SSEEEEEEEEEEEE  S  SSS  EEEEEEEEEEEESS EEEEEEE  S EE -----  EEEESSS     EEEEEEETTTTEEE:    
ExpBur          :eeeeeeebbeeebeebbebebbebebbbebeeeeeeebbbebebebebebeeebebbbbbbeebebe-----ebebebeeebeebeeeeeeebeebbbbb:    
Contact         :                    b b                       b                                                     

queryA       164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPN: 263
                :*******     **  *** *************** **** ** **** *  ************* ** ********  ******  *** **** ****:
5lg6_A_1     141:VHLKGSLQPGHUYEUESEFQGELADDLAGFYRSEYUEGNVKKVLATTQUQSTDARKSFPCFDEPAUKATFNITLIHPNNLTALSNUPPKGSSTPLAEDPN: 240
SecStr          :EEEEEEE TT EEEEEEEEEEE BSSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B   TTS BEEEEEEEEETTSEEEESS BSS  EE SS TT:    
ExpBur          :bbbeeebeeeeebebbbebebebbeebbbbbbbebebeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeee:    
Contact         :                                                                      b                             

queryA       264:WNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYR: 363
                :* **** ***  ****** *****  *   * *********** *** *** ************** ** * ********* ******** *********:
5lg6_A_1     241:WSVTEFETTPVUSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGUYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAUENWGLVTYR: 340
SecStr          :EEEEEB    SB GGG  EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTT    SSEEEEEEESS SSSEE  TTEEEEE:    
ExpBur          :bbbbebeebeebbbbbbbbbbbebeeeeeebeeebebebbbbbebbeeebbebbbebbbebbbebbebbebebebebbbbbbbbbbeeebbbbbbbbbbb:    
Contact         :       b                                                                                            

queryA       364:ENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEIN: 463
                :** ***** *** ************************  ********************* ********** *  ***** *********** *** * *:
5lg6_A_1     341:ENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVUAVDALASSHPLTTPAEEVN: 440
SecStr          :HHHH   TTT  HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHHSTTT GGGGHHHHTHHHHHHHHTSTT   SS  GGG  :    
ExpBur          :bbbbbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeeebeebebeebbbbebbbebbebbbbeebbebbbeeeebe:    

queryA       464:TPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLS: 562
                :******* ** ********* * ** ** ** ** ******* ****** ** ** *** **    ** ** *** *  ***** ********* **  *:
5lg6_A_1     441:TPAQISEUFDSISYSKGASVIRULSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIUDRWTLQUGFPVITVDTKTGNIS: 540
SecStr          :SHHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHHHT SS   SS HHHHHHHHHHS S EEEEEETTTTEEE:    
ExpBur          :eeeebbbbbbebbebbbbbbbbbbbebbebebbeebbbebbeebeeeebebebbbebbeebbeeeeeeebeeebeebbbbbbebebbbbbebebeebebe:    

queryA       563:QEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661
                :* ****           * * ***** **  *  *  *** **  ****** *    ***** *****  ***** *** ** ***   * ******** :
5lg6_A_1     541:QKHFLLXXXXXXXXXXAFDYLWIVPISSIKNGVUQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRUIQHQLQTNLSVIPVINRAQV: 640
SecStr          :EEE   ----------  TT   EEE EEETTEE   EEE SSSEEE GGG   TT  EEESGGG SSSEEEE HHHHHHHHHHHHH GGGS HHHHHHH:    
ExpBur          :bebbee----------eeeeebbbbbbbbbeeeebeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeebeebeebbbbbb:    

queryA       662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTAC: 761
                :* * **** ** ******* *****  *  * ** ********* * ********* * ** *** *** **   * ** * **** ***** *******:
5lg6_A_1     641:IYDSFNLATAHUVPVTLALDNTLFLNGEKEYUPWQAALSSLSYFSLUFDRSEVYGPUKKYLRKQVEPLFQHFETLTKNWTERPENLUDQYSEINAISTAC: 740
SecStr          :HHHHHHHHHTTSS HHHHHHTTGGGGG   HHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS  SSHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbeebebebbbebbebbeebeebbbbebbbebbebbebbbbeeebeeebeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbb:    

queryA       762:SNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATS: 861
                :*** * **     ** **   * *********** *********   ***** *   * ********* ***** * * ***** ***************:
5lg6_A_1     741:SNGLPQCENLAKTLFDQWUSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATS: 840
SecStr          :HTT HHHHHHHHHHHHHHHHSTTS  S HHHHHHHHHHHHHHS HHHHHHHHHHHHH   HHHHHHHHHHGGG S HHHHHHHHHHTT TTTS HHHHHH:    
ExpBur          :ebbbeebeebbeebbeebeeeeeeeebebbbbebbbebbbeeebeebbebbbebbeeeebbbbbebbbebbbbbeeeebbeebbeebbeeeebeebbbbe:    

queryA       862:TIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQW: 961
                :** **  ***** * ************ **  ********** ****** * ********** *   ******************************* *:
5lg6_A_1     841:TINSIASNVIGQPLAWDFVQSNWKKLFQDYXXGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNUDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNW: 940
SecStr          :HHHHHHHSTTHHHHHHHHHHHHHHHHHH  --  SHHHHHHHHHHTT  SHHHHHHHHHHHHHTSSS  GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbbebbebeebbebbbebbeeebeebeeeb--eeebbeebbebbbebbbeeebbeebeebeeebeeeebebbeebbebbbeebeebbebbeebeeebbeb:    

queryA       962:FTENS: 966
                :* * *:
5lg6_A_1     941:FIEHS: 945
SecStr          :HHHH :    
ExpBur          :beeee:

Protein Model on 5lg6_A_1_D_1 (TEMPLATE: 5lg6 )

Input Residue Numbers for Focused Sites