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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [902 aa] | Aminopeptidase N :AMPN_PIG | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [11 aa] | substance P | 213Q 351A 352G 353A 354M 355E 380E 384T 385V 388H 389E 411E 415S 418E 419Y 434L 437L(P) 438N(G) 439D 441Y 442R 445A 472F 477Y 478S 568L 663N(Y) 667N 692Y 696E(Q) 700S 701S (identity: 87.5 %/79.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4hom_A_1 identity=79.8% |
queryA 67:QSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHL: 166 :*** ******* ** **** ********** *** *** * *** * * ************** *** ******* ** * ** ***** ********: 4hom_A_1 1:QSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVVHL: 99 SecStr : GGGSSS SSEEEEEEEEEEEE S SSS EEEEEEEEEEEESS EEEEEEE S EE - SSSS EEEESTT EEEEEEETTTTEEEEEE: ExpBur :eeeebeeeebeebbebebbebebbbebeeeeeeebebebebebebebeeebebbbbbbbebebe-beeeebebeeeeebeebebeebeebeebbbbbbbb: queryA 167:KGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNV: 266 :**** *** *** ******************** ** ****** **************** ******** ******* *** **** ***** *: 4hom_A_1 100:KGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSV: 199 SecStr :EEEE TT EEEEEEEEEEE SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B STT BEEEEEEEEETTSEEEESS BSSS EE TT TTEEE: ExpBur :eeebeeeeebebbbebebebbeeebbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbb: Contact : b queryA 267:TEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENS: 366 :*** *** ******* ***** * * *********** *** *** ************** ** * ********* ******************** : 4hom_A_1 200:TEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENA: 299 SecStr :EEB SB GGG EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTTS SSSEEEEEEETT TT EE TTEEEEEHHH: ExpBur :bebeebeebbbbbbbbbbbebeebeeebeeebebebbbebebbeeebbebbbebbbebbebbeebbebebbbebbbbbbbbebeeebbbbbbbbbbebeb: Contact : bbbbb queryA 367:LLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPA: 466 :***** *** ************************ ********************* ********** * ***************** *** * ****: 4hom_A_1 300:LLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPA: 399 SecStr :H TTT HHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHHHHTSTT S GGG SHH: ExpBur :bbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbbeeeebebee: Contact : b bb bb b b bb b bbb bb b queryA 467:QISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEH: 565 :**** ** ********* **** ** ** ** ******* ****** ** ** *** ** ** ** *** ** *************** ** ** *: 4hom_A_1 400:QISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKH: 499 SecStr :HHHTTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTSEE HHHHHHHHHHHHHT SS SS HHHHHHHHHSS S EEEEEETTTTEEEEEE: ExpBur :ebeebeeebbebbbbbbbbbbbebbeeebbeebbbbbbeebeeeebebeebbebbbebbeeeeeeebeeebebbbbbbbebbbbbbbebebeebebebeb: Contact : b bb queryA 566:FLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIIND: 664 :**** ***** * * * ***** ** * * *** ** ****** * ***** ***** ***** *** ** *** * ******** * *: 4hom_A_1 500:FLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYD: 599 SecStr : S TT S TTTT EEE EEETTEE EEE SSSEEE GGG TT EEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHHHHH: ExpBur :bbbeeeeeeeeebeeebbbbbbbbbbeeeeebeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeebeebebbbbbbbbbb: Contact : b b queryA 665:AFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNG: 764 : **** ** ******* ***** * **** ********* ************* ** *** *** ** * ** * ********** **********: 4hom_A_1 600:SFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNG: 699 SecStr :HHHHHHTTSS HHHHHHTTGGGGG SHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS SSHHHHHHHHHHHHHHHHTT: ExpBur :bbebbebeebebebbbebbebbeebeebbbbbbbeebbeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbbebe: Contact : b b b bb queryA 765:VPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTII: 864 : * ** ** *** * *********** ********* ***** * * ********* ***** * * ***** ***************** : 4hom_A_1 700:LPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATSTIN: 799 SecStr : HHHHHHHHHHHHHHHH TTS S GGGHHHHHHHHHHHS HHHHHHHHHHHHH SHHHHHHHHHHHTT HHHHHHHHTTTT TTTS GGGHHHHHH: ExpBur :beebeebbeebbeebeeeeeeeebebbbbebbbebbbeeeeeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebeeeeebeeebbbebbb: queryA 865:SITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTE: 964 :** ***** * ************ ************** ****** * ********** * ******************************* ** *: 4hom_A_1 800:SIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIE: 899 SecStr :HHHHSTTHHHHHHHHHHHT TTTTTSSSSS HHHHHHHHHTT SHHHHHHHHHHHT SSS GGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbebeebbebbbebbeeebebbeebeeeeebebeebbebbbebbbeeebbeebeebbeeeeeeebeebeebbeebbeebeebbebbeebeeebbebbee: queryA 965:NS: 966 : *: 4hom_A_1 900:HS: 901 SecStr :H : ExpBur :eb: |