[pdbjlvh2]Protein Model on 3qnf_C_1_K

Protein Model on 3qnf_C_1_K_1 (TEMPLATE: 3qnf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AMPN_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [800 aa]	Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN
2	b		K 1 (C)	non-polymer(NAG)	2-acetamido-2-deoxy-beta-D-glucopyranose	185E(N) (identity: 0.0 %/34.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3qnf_C_1 identity=34.3%

queryA        71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNY---TLSQGHRVVL--RGVGGSQPPDIDKTELVEPTEYLVVH: 165
                :**  ***    *  *       **        * *   *  *    *  ** **  *     **  *    *          *      *  * * * * :
3qnf_C_1      55:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAXXXLSEEPLQVLEHPRQEQIALLAP-EPLLVG: 148
SecStr          :   SS  TTEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE  S EEEEEEEEE  --- EEEEEEEEEEGGGTEEEEEEE-EEE BT:    
ExpBur          :beeeebbeebebebbebbbebebee-----eebbbebebebebeeebebbbbbbeebeeeebbbebee---eeeeebeeeeeeeeebbbbebe-eebeee:    

queryA       166:LKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPE: 260
                :*    *            * *     *** * *   **  *   * **     **  ******** ** * *         * *** * *       * *:
3qnf_C_1     149:LPYTVV--------IHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIE: 239
SecStr          : EEEEE--------EEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTGGGTS B  STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEE:    
ExpBur          :eebebb--------bbbebebbeeeebbbbbebeeeeeeee-ebbbbbbbeebbbbbbbbbbbbebbbebbbbbebeeebebbbbbeeeeeeeeeeeebb:    
Contact         :                   b                                                                                

queryA       261:DPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLV: 360
                :*       *  * ****** *** * *  * *    **     * *  *     ****      * *       ****** *    ***  ******** :
3qnf_C_1     240:D------HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLT: 331
SecStr          :E------EE    SB GGG  EEEE  EEEEEE TT  EEEEEE TTTG--GGGHHHHHHHHHHHHHHHHHHTS  SSSEEEEEEETT  SSEE  TTEE:    
ExpBur          :b------bbeebeebbbbbbbbbbbbbeeeeeebeeebebbbbbbeeeb--eebebbbebbbebbebbbebbebebebebbbbbbbeebeeebbbbbbbb:    

queryA       361:TYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPAS: 460
                :****  ****   ** * *       ************** *************   *        *     *          * **** **** ***  :
3qnf_C_1     332:TYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP--: 428
SecStr          :EEEGGGT   TTT  SSSHHHHHHHHHHHHHHHHBTTTBEESSGGGHHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHSSTT   SS  --:    
ExpBur          :bbbbebbbebeeebbeeeebebbbebbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbeeebeebbee--:    

queryA       461:EINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIM: 540
                :    *          ** ***  * **   ** * ** *   **    * **    ***                                    *   *:
3qnf_C_1     429:-VENPXXXXXXXXDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMM: 527
SecStr          :- S  -------- HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTSEE HHHHHHHHTT -----------------------------  HHHHH:    
ExpBur          :-eeee--------eeeeebbbbbbbbbbebbeeeebeebbbebbeebeebbbebbebbebbeee-----------------------------eebeebb:    

queryA       541:NRWTLQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEE: 637
                :* **** *** **  *  *      ***                * * ** * *          *        *      **   *    *** * *   :
3qnf_C_1     528:NTWTLQKGFPLITI-TVRGRNVHMKQEHYM----KXXXXXXXTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDD: 621
SecStr          :HHHHHS S EEEEE-EEETTEEEEEEEE  ---- -------      EEEEEEESS  S EEEEE SSE-EEEE SS  S EEESGGG SSSEEEE TT:    
ExpBur          :ebbbebbbbbbbbb-beeeeebebebebbe----e-------eeeebbbbbbbbbeeeeeeeeebbeeee-eebebeeebebbbbbbbbbbbbbbbbeee:    

queryA       638:NWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFR: 734
                : *      *   * *     **  ** ** * *  *     **   * *  *   **    *  *    ***   *  **    *  *      *     :
3qnf_C_1     622:GWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI----: 717
SecStr          :HHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHHGGGGG  SHHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHHHHH----:    
ExpBur          :ebeebbebbeeebeebeebbbbbbbbbbbbbbeeeebebebbbebbebbbebeebbbbebbbebbeebbebbbbeebeebbeebbebbbebbbebb----:    

queryA       735:NNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALAC: 834
                :     *                   **      *     * *  * *   *          *   *      * ***            *      **  :
3qnf_C_1     718:-DKQTWTD-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCR: 813
SecStr          :-HT  SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S   HHHHHHHH--HHHTSSHHHHHHHHHHHHT   SHHHHHHHHHHHS:    
ExpBur          :-eebebbe-eebbbebebbbebbbbbbebebeebeeebeeebeebbeeebeeebbebbbbbbb--bbbbeeeebbeebeeeeeeeeeebbbebbeebbbb:    

queryA       835:SKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGT: 934
                :      *   *                    *  *  *  * * *                 *        *  ***   *                   :
3qnf_C_1     814:TQNKEKLQWLLXXXXXXXXXXXXXXXQILTLIGRNPVGYPLAWQFLRKXXXXXXXXXXXXXXSIAHMVMGTTNQFSTRTRLEEVKGXXXXXXXX--XXXX: 911
SecStr          : S HHHHHHH --------------- HHHHHHHSSSSHHHHHHHHH --------------   THHHHTTTT  SHHHHHHHT --------------:    
ExpBur          :beeeebbeeee---------------eebeebbebeebbebbbeeeee--------------eeeebeeebbebbbbeebeeebee--------------:    

queryA       935:RALEQALEKTKANIKWVKENKEVVLQWF: 962
                :    *  *    ** *   *      * :
3qnf_C_1     912:XXXQQTIETIEENIGWMDKNFDKIRVWL: 939
SecStr          :--- TTHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :---eebeebbeebbebbeebbeebeebb:

Protein Model on 3qnf_C_1_K_1 (TEMPLATE: 3qnf )

Input Residue Numbers for Focused Sites