[pdbjlvh2]Protein Model on 3q7j_B

Protein Model on 3q7j_B_1 (TEMPLATE: 3q7j )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(AMPN_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [780 aa]	Tricorn protease-interacting factor F3 :TRF3_THEAC

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3q7j_B_1 identity=37.6%

queryA       173:DSQ-YEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEFHT: 271
                :***       * *   * * * *      *       **  ** ***  *** * ** ** * **    **  * *** **       *     * **  :
3q7j_B_1      65:DSQPQKIEISFAGKVSDSLSGIYYAGRENGMI-----TTHFQATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPK-----RIEVSERKVVEFQD: 154
SecStr          : SS EEEEEEEEEE BSSSSEEEEESSSS EE-----EEE TTT GGGTS B   TT  BEEEEEEEEETT EEEESS EE-----EEEESSEEEEEE  :    
ExpBur          :eeeebebebbbbbebeeeeebbbbbbeeebbb-----bbbbebbbbbebbbbbbebeebbbbbbbbbbbeebebbbbbeee-----eeeeeeebebebee:    

queryA       272:TPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDP: 371
                :** ******      * *         **               * *        *       ** ***   *  * * ********  * **     * :
3q7j_B_1     155:TPRMSTYLLYVGIGKFRYEYEKYRDIDLI-----LASLKDIRSKYPLDMARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENWGAITFRE--IYMDI: 247
SecStr          :  SB GGG  EEEE  EEEEEEETTEEEE-----EEESS    SHHHHHHHHHHHHHHHHHTS  SSSEEEEEEETT TT EE  TTEEEEEH--HHH  :    
ExpBur          :beebbbbbbbbbbbebeeeeeebeebebb-----bbbbeebebebbbebbeebbebbbebbebebebebbbbbbbbebeebbbbbbbbbbbee--eebeb:    

queryA       372:LSSSSSNKER-VVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISE: 470
                :   *     *   ****** ****** ***  ********* **    *   *   * *                 * *   **          *  ** :
3q7j_B_1     248:AENSAVTVKRNSATVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEV---DVRDPDEISQ: 344
SecStr          : TT  HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHH TTS HHHHHHHHTHHHHHHHTTSSS   S  ---  SSS  SST:    
ExpBur          :beebeeeeebebbbbbbbbbbbbbbbbbbbbeebebbbbbbbbbbbbbbbbbeeeeeebebbbebbeeebbbbbebbbbeebbebeb---ebeebebeee:    

queryA       471:LFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTG--TLSQEHFLL: 568
                : ** *** **** ***         *  *   **      *     **                 *   *  *    * ***         *  *  ***:
3q7j_B_1     345:IFDEISYGKGASILRMIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVSGK-------PVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLL: 437
SecStr          :TSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHH S------- HHHHHHHHHHSSS EEEE    TTEEEEEEEEEET:    
ExpBur          :bebebbbbbbbbbbbbbbbbbbeeebeebbbebbeeeeeeebebbebbebbeeebee-------ebeebbeebbeeebbbbbbbeeeeeebbbebbbbbb:    

queryA       569:DPDSNVTRPSEFNYVWIVPI-TSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFN: 667
                :          *    * **      **       *    *     *         *    * *** **            ** *      *     * * :
3q7j_B_1     438:N--------GEEEGRWPVPVNIKKKDGVER---ILLEDEA-----SIEADGLIKINADSAGFYRVLYDDATFSDVMGHY-RDLSP---LDRIGLVDDLFA: 517
SecStr          :T--------EEEE    EEEEEEESS EEE---EEESS E-----EEE TTEEEESGGG SSSEEE  HHHHHHHHTTG-GG  H---HHHHHHHHHHHH:    
ExpBur          :e--------eeeebebbbbbbbbbeeeeee---eebeeee-----ebebebbbbbbbebbbbbbbbbeeebbeebbebe-eebee---bbbbbbbbbbbb:    

queryA       668:-LASAHKVPVT: 677
                : * * *  * *:
3q7j_B_1     518:FLLSGHIDPET: 528
SecStr          :HHHHSSS HHH:    
ExpBur          :bbbbeebebeb:

Protein Model on 3q7j_B_1 (TEMPLATE: 3q7j )

Input Residue Numbers for Focused Sites