Protein Model on 6m64_A_1_E_1 (TEMPLATE: 6m64 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(SMAD3_HUMAN) A 1 (A) polymer(polypeptide(L)) [203 aa] Mothers against decapentaplegic homolog 2 :SMAD2_HUMAN
2 b E 1 (E) polymer(polypeptide(L)) [193 aa] Mothers against decapentaplegic homolog 2 :SMAD2_HUMAN 224V 225T 226Y 227C(S) 229P 247T 249H 360F 361E 364Y 365Q 367T 368R 371T 373R 390T 397E 399H 401N 404L 405Q 407L 408D 411L 412T 416S 417P 419I(V) 420R 421C 422S 423S(E) 424V(M) (identity: 87.9 %/96.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6m64_A_1 identity=96.0%
queryA       223:PVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQ: 322
                :**** ******** ****************** ************************** ** *************************************:
6m64_A_1       6:PVTYSEPAFWCSIAYYELNQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNATVEMTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQ: 105
SecStr          :       SSSEEEEEEETTEE S  EEE SSEEEEESS  SS TTEEEGGG   TT  HHHHHHHHHHTT EEEEEETTEEEEEE SSS EEEE HHHHH:    
ExpBur          :eeeeeeeeebbbbbbbbeeeebeeebebeeeebbbbeeeeeeeeeebbbeebebeebeeebeebbeebeebbebbeeeeebbbebbbeebbbbbbbbbbe:    
Contact         : bbbb b                 b b                                                                         

queryA       323:RYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIRCS: 422
                :************************************************************************************************ ***:
6m64_A_1     106:RYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSVRCS: 205
SecStr          :HHT  TT  EEE TT EEEEEEHHHHHHHHHHHHTT HHHHHGGGGGGEEEEEES   STTSS  SGGGSSSEEEEEEHHHHHHHHHHHTTS   SS   :    
ExpBur          :eeeeeeeeebebeeeeebebbbbeebeebbeebeeeeeeebeebeebbbbebbbbebbbeeeebeebeebbbbbbbebeebebebeeeeeebeeeeeeee:    
Contact         :                                     bb  bb bb  b b                b      b b b  bb bb  bb   bb bbbb

queryA       423:SV: 424
                :  :
6m64_A_1     206:EM: 207
SecStr          :S :    
ExpBur          :ee:    
Contact         :bb                                                                                                  


Input Residue Numbers for Focused Sites

ex) 2,15,123