[pdbjlvh2]Protein Model on 8xzi_A_1_F

Protein Model on 8xzi_A_1_F_1 (TEMPLATE: 8xzi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AGTR1_HUMAN)	A 1 (R)	polymer(polypeptide(L)) [309 aa]	Apelin receptor :APJ_HUMAN
2	b		F 1 (R)	non-polymer(A1D5N)	(3~{S})-5-methyl-3-[[1-pentan-3-yl-2-(thiophen-2-ylmethyl)benzimidazol-5-yl]carbonylamino]hexanoic acid	35Y 77F 84W 105S 108V(I) 109S(F) 112L(M) 253W 256H(Y) 260T(K) 263D(Y) 281D(M) 284M(F) 288I(T) 291A(S) 292Y (identity: 37.5 %/35.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8xzi_A_1 identity=35.6%

queryA        30:MIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKT-VASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYL: 128
                : **  *   *  *  ** **          *   *  *   ** *** *  ****** **   * ****   **  *     * ***** ** ** ****:
8xzi_A_1      30:LIPAIYMLVFLLGTTGNGLVLWTVFRSSREKRRSADIFIASLAVADLTFVVTLPLWATYTYRDYDWPFGTFFCKLSSYLIFVNMYASVFCLTGLSFDRYL: 129
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHHHHS STT  TTHHHHHHHHHHHHHHHHTHHHHHHHHHTTS   S HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebbeebeebeeebeebbeebbebbeeeeeeeeeebbebbbbbbebbeebbebbebbbebbeeebebeeeeeebeebbbebbbbbbbbbbbbbbbbebeeb:    
Contact         :     b                                          b      b                    b  bb  b                

queryA       129:AIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFHYE-----SQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALK: 223
                :*** *      *      *     * ** *   *    *     ***    *   *      *       ***      **  ** * ** *  *     :
8xzi_A_1     130:AIVRPVANARLRLRVSGAVATAVLWVLAALLAMPVMVLRTTGDLENTTKVQCYMDYSMVATVSSEWAWEVGLGVSSTTVGFVVPFTIMLTCYFFIAQTIA: 229
SecStr          :HHTSTTTSHHHHHHHSTHHHHHHHHHHHHHHTHHHHHHEEEE  TTT S EEEE  TTT SSGGGHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeeeebeeeeeeebeeeebeebeeebeeebeebeebbeeeeeeeeeeeebebebeeebeeeeeeeeeeeebeebbeebbeebbeebeebbeebeebbb:    

queryA       224:KAYEIQKNKP--RNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKR: 311
                :                   **   *  *   * *      *  *  *     *          *   ** * * ****  * *    *  :
8xzi_A_1     230:GHFRKERIEGLRKRRRLLSIIVVLVVTFALCWMPYHLVKTLYMLGSL-LHWPCDFDLFLMNIFPYCTCISYVNSCLNPFLYAFFDPRFRQ: 318
SecStr          :HH  SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TT  HHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSSSHHHHH:    
ExpBur          :eeeeeeeeebeeeeeeeeebbeebbebbbebbeebbebeeeebebee-eeeeeeeebebebeebbbbbebbebbbebbebbbbebeebee:    
Contact         :                               b  b   b  b                 b  b   b  bb

Protein Model on 8xzi_A_1_F_1 (TEMPLATE: 8xzi )

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