[pdbjlvh2]Protein Model on 8tlm_C_1_B

Protein Model on 8tlm_C_1_B_1 (TEMPLATE: 8tlm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AGTR1_HUMAN)	C 1 (C)	polymer(polypeptide(L)) [266 aa]	C-C chemokine receptor type 8, Green fluorescent protein fusion :CCR8_HUMAN:GFP_AEQVI
2	b		B 1 (B)	polymer(polypeptide(L)) [215 aa]	Fab light chain	185E(N) 186S(Q) 187Q (identity: 33.3 %/30.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8tlm_C_1 identity=30.9%

queryA        29:VMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYL: 128
                :      *   **    *****  *     **     * ****** ** *    *    *      * **   **  *       * * *  *  * ****:
8tlm_C_1      71:LLLAVFYCLLFVFSLLGNSLVILVLVVCKKLRSITDVYLLNLALSDLLFVFSFPFQTYY--LLDQWVFGTVMCKVVSGFYYIGFYSSMFFITLMSVDRYL: 168
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHHHHHS    SHHHHHHHHHHHHHHHHHHHHHHHHHH--HSS   SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebbeebeebeeebeeebeebeebbeeebebeebebbbbbbbbebbbbbbebbeeebee--beeebeeeeeebeebbbebbbbbbbbbbbbbbbbebbbb:    

queryA       129:AIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYEI: 228
                :* **       **       *   ** *  *  *      *          *   *  *     *      **** * ** *    *  *   **     :
8tlm_C_1     169:AVVHAVYALKVRTIRMGTTLCLAVWLTAIMATIPLLVFYQV--ASEDGVLQCYSFYNQQTLKWKIFTNFKMNILGLLIPFTIFMFCYIKILHQLKRX---: 263
SecStr          :HHHSHHHHHHH SHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EESSS EEEEE   TTTHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH  ----:    
ExpBur          :eeeeeeebeeeeeeeebeeebeebbeebeebbeebbebbee--beeeeeeebebeeeeeeeeeeeebbebbbeebbeebeeebeebbeebeeeeee----:    
Contact         :                                                        bbb                                         

queryA       229:QKNKPRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKRY: 312
                :                 *      * *     **  *          *      *   *  *     * **  * * * ***  :
8tlm_C_1     264:--XXXXXXXXIRLVLIVVIASLLFWVPFNVVLFLTSLHSXXXXXXXSISQQLTYATHVTEIISFTHCCVNPVIYAFVGEKFKKH: 345
SecStr          :---------- HHHHHHHHHHHHHHHHHHHHHHHHHHH ------- HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHH:    
ExpBur          :----------eebbeebbebbbebbeebbebbeeebeee-------eeeeebeeeeeebebebbebbbebbebbeeebeebeeb:

Protein Model on 8tlm_C_1_B_1 (TEMPLATE: 8tlm )

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