Protein Model on 8hk2_A_1_J_1 (TEMPLATE: 8hk2 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AGTR1_HUMAN) A 1 (A) polymer(polypeptide(L)) [284 aa] C3a anaphylatoxin chemotactic receptor :C3AR_HUMAN
2 b J 1 (A) non-polymer(CLR) CHOLESTEROL 124I(L) 128L 132H(K) 135K(W) 210I (identity: 40.0 %/31.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8hk2_A_1 identity=31.8%
queryA        36:SIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMK: 135
                :*  *  *  ** **  *    *   **     * * ****   * **      *    ** *  ***        *  *******  * ** *    *  :
8hk2_A_1      31:SLTFLLGLPGNGLVLWVAGLKMQ-RTVNTIWFLHLTLADLLCCLSLPFSLAHLALQGQWPYGRFLCKLIPSIIVLNMFASVFLLTAISLDRCLVVFKPIW: 129
SecStr          :HHHHHHHHHHHHHHHHHHHHSS -  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT   S TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHH:    
ExpBur          :eebeeebeebbeebeebbeeeee-eebebbbbbebbebbbebbebbeeeeeebeeebebeeeeeebbeebbeebbbbbbbbbbbbbbbebebeeeeeeee:    
Contact         :                                                                                        b   b   b  b

queryA       136:SRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLP-------------------------------------------: 192
                :    *    *   *  **  *     *    *  *   * *                                                           :
8hk2_A_1     130:CQNHRNVGMACSICGCIWVVAFVMCIPVFVYREIFTTDNHN----------------RCGYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 213
SecStr          :HHHH  HHHHHHHHHHHHHHHHHHTHHHHHH EEEEETTEE----------------EEE  --------------------------------------:    
ExpBur          :beeeeeeeebeeebeebeeebeebbeebeeebebeeeeeee----------------ebeee--------------------------------------:    

queryA        -1:----------------------------------------------------------------------------------------------------:  -1
                :                                                                                                    :
8hk2_A_1     214:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 313
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       193:---------------------IGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYEIQKNK--PRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLG: 269
                :                          *    *** *  *    *  *          *           *      *  *   * *  **  *  *    :
8hk2_A_1     314:XXXXXXXXXXXXXXXVPTPL-VAITITRLVVGFLLPSVIMIACYSFI------VFRMQRGRFAKSQSKTFRVAVVVVAVFLVCWTPYHIFGVLSLLTD--: 404
SecStr          :---------------    H-HHHHHHHHHHHTHHHHHHHHHHHHHH------HHHHHSSSS     HHHHHHHHHHHHHHHHHHHHHHHHHHHHTS --:    
ExpBur          :---------------eebee-eebbeebbeebbeebbeebeebbeeb------beeeeeeeeeeeeeeeeeebeebbeebeebbeebbeeeeeeeeee--:    
Contact         :                                      b                                                             

queryA       270:IIRDCRIADIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKRYFLQLLKYI: 320
                :                  *  *  * * **  *  *** *     *    *:
8hk2_A_1     405:--PETPLGKTLMSWDHVCIALASANSCFNPFLYALLGKDFRKKARQSIQGI: 453
SecStr          :--TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHH:    
ExpBur          :--eeeeebeebebeeebbebebbbbbbebbebbbeeeeebeeebeebeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123