[pdbjlvh2]Protein Model on 8efo_A_1_H

Protein Model on 8efo_A_1_H_1 (TEMPLATE: 8efo )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AGTR1_HUMAN)	A 1 (R)	polymer(polypeptide(L)) [287 aa]	Mu-type opioid receptor :OPRM_HUMAN
2	b		H 1 (R)	non-polymer(8QY)	N-[(2S)-2-(dimethylamino)-3-(4-hydroxyphenyl)propyl]-N'-[(2S)-1-(thiophen-3-yl)propan-2-yl]urea	80T 84W(Q) 104A(V) 105S(I) 108V(D) 109S(Y) 112L(M) 196G(K) 199K(V) 256H(I) 260T(V) 292Y (identity: 16.7 %/34.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8efo_A_1 identity=34.4%

queryA        29:VMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYL: 128
                :  *  ****  *** *** **  **  * * **       ******     ***   *   *   ****  ****       *   * * *   * *** :
8efo_A_1      70:ITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMG-TWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYI: 168
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-S  S HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebbeebeebbeebeebbeebbebbeeebeeeebbbbbbbbbbebbbebbebbeebbeeeeee-ebeeeeeebeebbbebeebbbbbbbbbbbbbebbeb:    
Contact         :                                                   b   b                   bb  bb  b                

queryA       129:AIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYEI: 228
                :*  ** *    **   **      * *     **                 *              *     *  *  * ***   * *    **     :
8efo_A_1     169:AVCHPVKALDFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQGS--IDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRML: 266
SecStr          :HHH HHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEETTE--EEEEE   SSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHSTTT:    
ExpBur          :eebeeeebeebeeeebbeeebeebbeebeebbeebeeebebeeeeee--eebebebeeeeeeeeeebeeebeeebbeebeeebeebbeebbeebeeeeeb:    
Contact         :                                                                   b  b                             

queryA       229:QKNKPRNDD---IFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITICIA--YFNNCLNPLFYGFLGKKFKRYFLQ: 315
                :   *        *       *  *   * *  *      *          *            ***  * * ****  * **   *** *  :
8efo_A_1     267:SGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALVT--------IPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFRE: 350
SecStr          :SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS --------    HHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHH:    
ExpBur          :eeeeeeeeebeeebebbeebbebbeebbeebbebeeeeeeee--------eeeeeebeeeebebbbbbbebbbebbebbbeebeebeebeee:    
Contact         :                              b   b                                 b

Protein Model on 8efo_A_1_H_1 (TEMPLATE: 8efo )

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