[pdbjlvh2]Protein Model on 7yon_E_1_D

Protein Model on 7yon_E_1_D_1 (TEMPLATE: 7yon )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AGTR1_HUMAN)	E 1 (R)	polymer(polypeptide(L)) [302 aa]	Neuropeptide Y receptor type 2 :NPY2R_HUMAN
2	b		D 1 (L)	polymer(polypeptide(L)) [25 aa]	Peptide YY(3-36) :PYY_HUMAN	80T(C) 84W(T) 87Y 88T 108V(Q) 172I 173E 181A(T) 182F(E) 195L(Y) 196G(S) 267Q 270I(V) 274C(S) 277A(L) 278D 279I(L) 280V(K) 282T(Y) 283A(K) 286I(F) (identity: 28.6 %/29.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7yon_E_1 identity=29.9%

queryA        35:YSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCF-LLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHP: 133
                :*  *   *  *****  *        **   *  *** ***    * **    ** *   *  *  **             *   **    ***  **  :
7yon_E_1      58:YCSIILLGVIGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMG-EWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRYRCIVYH: 156
SecStr          :HHHHHHHHHHHHHHHHHHHHH TT   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-S  S HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHST:    
ExpBur          :beebeeebeeebeebeebbeeeeebeebebbbbbbbbebbeebbeebbeebbeebbee-ebeebeeebeebbebeebbbbbbbebbbbbbebebeeebee:    
Contact         :                                              b   b  bb                   b                         

queryA       134:MKSRLRRTMLVAKVTCIIIWLLAGLASL---PAIIHRNVFFIE---NTNITVCAFHYESQNSTL-PIGLGLTKNILGFLFPFLIILTSYTLIWKALKK--: 224
                :  *              ** *  *   *   *  * *    **      *  *                 *         *  **  *** **  **   :
7yon_E_1     157:LESKISK-----RISFLIIGLAWGISALLASPLAIFREYSLIEIIPDFEIVACTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKNHV: 251
SecStr          :TS    H-----HHHHHHHHHHHHHHHHHTHHHHHTEEEEEE  STT  EEEEEE  SS SS HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHS  :    
ExpBur          :eeeeeee-----eebeeebeebeeebeeebeebeeebeeeeeeeeeeeeebbbeeeeeeeeebeebbeebeebbeebbeebeeebeebbeebeeeeeeee:    
Contact         :                                         bbb         bb             bb                              

queryA       225:--AYEIQKNKPRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITI--CIAYFNNCLNPLFYGFLGKKFKRYFLQLLK: 318
                :           *     *     *  *   * *   *       **    *    *        *    **      *** **         **    :
7yon_E_1     252:SPGAANDHYHQRRQKTTKMLVCVVVVFAVCWLPLHAF-------QLAVDIDSQVLDLKEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFR: 342
SecStr          : STT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHH TTTTS TTHHHHHHHHHHHHTTHHHHHHHHHSSSSHHHHHHHHHHH :    
ExpBur          :eeeeeeeeeeeebeeeeeebeebeeebbebbeebbeb-------eeebeeeeebeeeeeeeeeebeebeebbebbebbbebbbeebeebeebbeeeee:    
Contact         :                                            b  b   b  bbbb bb  b   b

Protein Model on 7yon_E_1_D_1 (TEMPLATE: 7yon )

Input Residue Numbers for Focused Sites