[pdbjlvh2]Protein Model on 6tod_A_1_Y

Protein Model on 6tod_A_1_Y_1 (TEMPLATE: 6tod )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AGTR1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [301 aa]	Orexin receptor type 1 :OX1R_HUMAN
2	b		Y 1 (A)	non-polymer(SOG)	octyl 1-thio-beta-D-glucopyranoside	87Y(L) (identity: 0.0 %/27.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6tod_A_1 identity=27.2%

queryA        45:GNSLVVIVIYFYMKLKTVASVFLLNLALAD-LCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPM--KSRLRRT: 141
                :** **           **   ** ** *** *     **           * **  ***             *  *     **  ** **   **  ** :
6tod_A_1      39:GNTLVCLAVWRNHHMRTVTNYFLVNLSLADVLATAICLPA-SLLVDITESWLFGHALCKVIPYLQTVSVSVAVLTLSFIALDRWYAICHPLLFKSTARRA: 137
SecStr          :HHHHHHHHHHH GGG  HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHSS  SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSS   HHHH:    
ExpBur          :bbebbeebbeeeeebeebbbebbbbbbebbebbbeebbeb-bbeebeeebbeebeeebeebbbbbbbbbbbbbebbeebbebbeebbbeeeeeeeeeeeb:    
Contact         :                                           b                                                        

queryA       142:MLVAKVTCIIIWL--LAGLASLPAIIHRNVFFIE----NTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKAL-------KKAYEI: 228
                :          **   **      *         *         **           *        *   * *       *  *   *           * :
6tod_A_1     138:L----GSILGIWAVSLAIMVPQAAVMECSSVLPELAARTRAFSVCDERWA--DDLAPKIYHSCFFIVTYLAPLGLMAMAYFQIFRKLWGRQIPGTTSXEV: 231
SecStr          :H----HHHHHHHHHHHHHTHHHHHHEEEEESSGGGTTT STTEEEEE  S--SSSHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHSS   TT   - H:    
ExpBur          :e----eebeebeeebeeebeebbebbebeeeeeeeeeeeeeebebebeee--eeeebeebbeebeeebbeebbeebeebbeebeeebeeeeeeeeee-ee:    

queryA       229:QKNKPRNDDIFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKRYFLQLLKYIPP: 322
                :     *     *  *  ** *     *      *      *  *       *  *        * *   **  * **  **   *        *:
6tod_A_1     232:KQMRARRKTA-KMLMVVVLVFALCYLPISVLNVLKRV--FGMFRQASDREAVYAAFTFSHWLVYANSAANPIIYNFLSGKFREQFKAAFSWWLP: 322
SecStr          :HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHT--T  S  GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHTT  :    
ExpBur          :eeeeebeeeb-ebbeebbeebeebbeeebebebeebb--eeeeeeeeeeeebeeebbebeebbbbbbbbbbebbeeebeebeebbebbeeeeee:

Protein Model on 6tod_A_1_Y_1 (TEMPLATE: 6tod )

Input Residue Numbers for Focused Sites