Protein Model on 6pt2_A_1_F_1 (TEMPLATE: 6pt2 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(AGTR1_HUMAN) A 1 (A) polymer(polypeptide(L)) [397 aa] Delta opioid receptor
2 b F 1 (A) non-polymer(OLA) OLEIC ACID 36S 85A(S) 86V(A) 89A(L) 90M (identity: 40.0 %/32.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6pt2_A_1 identity=32.5%
queryA        29:VMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYL: 128
                :  *  ***    **  ** **  **  * * **        ****      ***       **  ****  ***            * * **    *** :
6pt2_A_1     166:IAITALYSAVCAVGLLGNVLVMFVIVRYTKMKTATNIYIFSLALAGALATSTLPFQSADYLME-TWPFGELLCKAVLSIDYYSMFTSIFTLTMMCVDRYI: 264
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHHHHHTS S SHHHHHHHHHHHHHHHHHTSHHHHHHHHHHT-S  S HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebeeebeebbeebeeebeebbebbeeebeeeebbbbbbebbbebbbebbebbeeebbeeeee-ebeeeeeebeebbbeeebbbbbbbbbbbebbebbbb:    
Contact         :       b                                                bb  bb                                      

queryA       129:AIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKKAYEI: 228
                :*  ** *    **   **   * ** **     *                **     *                 *  * ***   * *    *      :
6pt2_A_1     265:AVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVM--AVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLL: 362
SecStr          :HHH TTTHHHHS HHHHHHHHHHHHHHTHHHHHHHHHH--EEEEEETTEEEEEE  SSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :bbbeeeebeeeeeeeebeeebeebbeebeeebeebeeb--bbbeeeeeeeebebebeeeeeeeeeeebeebeeebbeebbeebeebbeebeeebeeeeee:    

queryA       229:QKNKPRNDD---IFKIIMAIVLFFFFSWIPHQIFTFLDVLIQLGIIRDCRIADIVDTAMPITICIAYFNNCLNPLFYGFLGKKFKRYF: 313
                :   *        *       *  *   * *  **     *         *    *  *    *   * *  ***  * ** * *** *:
6pt2_A_1     363:SGSKEKDRSLRRITRMVLVVVVAFVVCWAPIHIFVIVWTLVDID-----RRDPLVVAALHLCIALGYINSSLNPVLYAFLDKNFKRCF: 445
SecStr          :TS  TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS   -----TT HHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHH :    
ExpBur          :eeeeeebbeeeebbeebeebbeebeebbbebbebeeeeeeeeee-----eeeeebbeeebebebebbebbbebbbeebeebeebeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123