[pdbjlvh2]Protein Model on 3oe6_A_1_F

Protein Model on 3oe6_A_1_F_1 (TEMPLATE: 3oe6 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(AGTR1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [418 aa]	C-X-C chemokine receptor type 4, Lysozyme Chimera :CXCR4_HUMAN:LYS_BPT4:CXCR4_HUMAN
2	b		F 1 (A)	non-polymer(GOL)	GLYCEROL	112L 115S 116V 199K(H) 203G 249F 253W 257Q(Y) (identity: 75.0 %/39.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3oe6_A_1 identity=39.4%

queryA        25:NYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSI: 124
                :*      ** *****  ** ** **  *     **        * *  *** *  *** ***       * *** ***        *** **  *   * :
3oe6_A_1      45:NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVAN--WYFGNFLCKAVHVIYTVNLYSSVWILAFISL: 142
SecStr          : THHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSS  HHHHHHHHHHHHHHHHHTTHHHHHHHHHT -- TT HHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeeeebbebbeebeeebeebbeebeeebeeeeeeeebbeebbebbbebbeebbebbeebbeebeeb--beeeeeebbbbbbebbbbbbbbbebbbbbbe:    
Contact         :                                                                                       b  bb        

queryA       125:DRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQNSTLPIGLGLTKNILGFLFPFLIILTSYTLIWKALKK: 224
                :********   *   *  *  **     *  * *   *  *  **   *      *   *   *              *   *   **  *  *      :
3oe6_A_1     143:DRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVS--EADDRYICDRFYP--NDLWVVVFQFQHIMVGLILPGIVILSCYCII------: 232
SecStr          :HHHHHHHS TT HHHHHHHHHTHHHHTTHHHHHHTTHHHHHHEEEE--EETTEEEEEE  S--STHHHHHHHHHHHHHHTHHHHHHHHHHHHHH------:    
ExpBur          :bbebbeeeeeebeeebeebbeeebeeebbeebeebbebbeebbebe--eeeeeeebebeee--eeeeeeebeeebeeebeeebbeebeebbeeb------:    
Contact         :                                                                          b   b                     

queryA       225:AYEIQKNKPRNDDIF-------------------------------------------------------------------------------------: 239
                :                                                                                                    :
3oe6_A_1     233:---------------ISKLXXXXXXXXXXXXXDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRG: 317
SecStr          :---------------HHT -------------     SS EE TTS EEETTTEEEES   HHHHHHHTTTTTTS  SS   HHHHHHHHHHHHHHHTTT:    
ExpBur          :---------------eeee-------------eeeeeeebeeeeeeebbbbeebebeeeeeeeebbeebbeeeeeeeebebeeeebeebeeebbeeebeb:    

queryA       240:------------------------------------------------------------------------------------------------KIIM: 243
                :                                                                                                *   :
3oe6_A_1     318:ILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFXXSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDXXXXXXXXXRKAL-KTTV: 416
SecStr          :TTT TTTHHHHHHS HHHHHHHHHHHHHH TTTGGG --  HHHHTT HHHHHHHHTTSSHHHHSHHHHHHHHHHHHTSS  --------- HHH-HHHH:    
ExpBur          :beeeeebeebbeebeeebeebbbebbeeeeeeebeee--bbeebeeeeeeebbeebeeeebeeebeeebeebbebbeebeee---------eeeb-eebe:    

queryA       244:AIVLFFFFSWIPHQIFTFLDVLIQLGIIRD-CRIADIVDTAMPITICIAYFNNCLNPLFYGFLGKKFK: 310
                :   * **  * *  *    *  * * **   *     *     **   * *  ****  * *** ***:
3oe6_A_1     417:ILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFK: 484
SecStr          :HHHHHHHHHHHHHHHHHHHHHHHHTTSS   SHHHHHHHHTTHHHHHHHGGGGGHHHHTTTTTT  TT:    
ExpBur          :ebbeebeebbeebeebbeeeeebeeeeeeeeeeeeeebeeebebbbbebbebbbbbbeebeeeeeeee:    
Contact         :     b   b   b

Protein Model on 3oe6_A_1_F_1 (TEMPLATE: 3oe6 )

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