[pdbjlvh2]Protein Model on 8y0w_B_1_C

Protein Model on 8y0w_B_1_C_1 (TEMPLATE: 8y0w )

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[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(EF1A1_HUMAN)	B 1 (CB)	polymer(polypeptide(L)) [768 aa]	Elongation factor 2 :EF2_HUMAN
2	b		C 1 (L5)	polymer(polyribonucleotide)	28S rRNA	15H 16V 17D 69R 71I 95H 129K(V) 130N(Q) 157S(R) (identity: 66.7 %/34.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8y0w_B_1 identity=34.8%

queryA         1:MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITID---ISLWKFETSK-------------:  84
                :* *     *  ** *** **** *  *  * * *            *  *   *      *  * * ** ***    ***   * *              :
8y0w_B_1      13:MDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGII----------ASARAGETRFT-----DTRKDEQERCITIKSTAISLF-YELSENDLNFIKQSKDGA:  96
SecStr          :HHSGGGEEEEEEE  TTSSHHHHHHHHHHHH SS----------S    SSS TT-----  STTTTTT    S EEEEEE-EE  HHHHTT  S   SS:    
ExpBur          :beebbbbbbbbbbbbbebbbbbbbbbbbeeebbe----------beeeeeebbbb-----beeeebeeeeebeebbbbbbb-bebeeeebebbeeeeeee:    
Contact         :              bbb                                                   b b                             

queryA        85:-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQ------KRYEEIVKEVSTY: 177
                :      ** *** **           * *   *         *      *      *            ****                   **  *   :
8y0w_B_1      97:GFLINLIDSPGHVDFSSEVTAALRVTDGALVVV-----DCVSGVCVQTETVLRQAIAERI---KPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVI: 188
SecStr          :EEEEEEEE   STTT HHHHHHHHH  EEEEEE-----ETTTBS HHHHHHHHHHHHTT ---EEEEEEE HHHHHHTS   HHHHHHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbbeeeebebbebbbbbbbbbbbbb-----bbeebebebbbbbbbbbbebeb---ebbbbbbbbbebbeeeebeeeebbeebbebbeebbeb:    
Contact         :           b                                 bb                          b                          

queryA       178:IKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWF----KGWKVTRK: 219
                :*   *           **  *  *  *      *     **  * *:
8y0w_B_1     189:ISTYGEGE--------SGPMGNIMIDPVLGTVGFGSGLHGWAFTLK: 226
SecStr          :HHHH SS --------TTTS   S  GGGT   EEETTTTEEE HH:    
ExpBur          :beeebebe--------eeeeeebebebbebbbbbbbbeeebbbbbb:

Protein Model on 8y0w_B_1_C_1 (TEMPLATE: 8y0w )

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