CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(EF1A1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [361 aa] | Elongation Factor Tu | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [366 aa] | Elongation Factor Tu | 356G(R) 357Y(H) 358A(T) 359P 360V(F) 361L(F) 364H(Y) 365T(R) 393F(M) 428D(E) 429M(G) 431Q(R) (identity: 8.3 %/31.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bbn_A_1 identity=31.9% |
queryA 5:KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMIT: 104 :* * * ***** ** * * * **** * * * *** * *****: 7bbn_A_1 9:KPHVNVGTIGHVDHGKTTLTAAITTVL---------------AKTYXXXXXXXXXXXXXXXXXXXGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMIT: 93 SecStr : EEEEEEEESTTSSHHHHHHHHHHHH---------------HHH ------------------- EEEEEE SS EEEEEE SSHHHHHHHHHH: ExpBur :eeebbbbbbbbeebbbeebbebbeebb---------------eeee-------------------eeeeeeeeeebebeebbbbbbbbeeeebbbbbbbe: queryA 105:GTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEP: 204 :* * * * * *** * ***** ** ** ** ** * * * * * *: 7bbn_A_1 94:GAAQMDGAILVVAATDGPMP-------QTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVREL------------------LSQYDF-----P: 163 SecStr : SS S EEEEEETTT S H-------HHHHHHHHHHHHT EEEEEE GGG HHHHHHHHHHHHHH------------------HHHTTS----- : ExpBur :beeebbbbbbbbbbeebeee-------bbeebbebbebbebeebbbbbbebeebeeeeebeebbeebbeb------------------beebeb-----e: queryA 205:SANMPWFKGWKVTRKDGNASGTT----LLEALDCILP-PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKS--VEMHHE: 297 : * * * * * **** * * * * * ** ** * * *** **** * * * * ** *** : 7bbn_A_1 164:GDDTPIIRGSALKALEGEAEWEAKIIELAEALDSYIPEPERAIDQPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTCTGVEMFXX: 263 SecStr :GGG EEE HHHHHTT HHHHHHHHHHHHHHHHHS GGGS EEE EEEETTTEEEEEEE BSEEETT EEEEESSSS EEEEEEEEEE --: ExpBur :beebebbebbbeebeeeeeebbeebbebbebbeeebeeeeeeeeeebbbbbeeeeeeeeeebbbbbebebbebeeeeebebbbbeeeeebbbebbeee--: queryA 298:ALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSG: 397 : * * *** ** * * * * * * * * * *: 7bbn_A_1 264:XXDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSITPHTT--FESEVYVLSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIE------LPEGVEMVMPG: 353 SecStr :-- EEETT EEEEEESS GGG TT EEESTTS EEEEE--EEEEEEE G--GGT SS EETT EEEETTEEEEEEEE------ TT EE TT: ExpBur :--ebbeeeeebbbbbeebbbeebeebbbbbeeeebeeeeb--bebbbbbbee--ebebbeeebeeebebebebbbbebebebe------beeeeeebeee: Contact : bbbbbb bb b queryA 398:DAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAV: 441 :* * *** * ** ** : 7bbn_A_1 354:DNIKMTVTLIHPIAMDEGL------RFAIREGGRTVGAGVVAKI: 391 SecStr : EEEEEEEEEEEEEE TT ------EEEEEETTEEEEEEEEEEE: ExpBur :eebebbbebeeebbbeeeb------ebbbeeeeeebbbbbbbee: Contact : bb b |