[pdbjlvh2]Protein Model on 5opd_B_1_Z

Protein Model on 5opd_B_1_Z_1 (TEMPLATE: 5opd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(EF1A1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [379 aa]	Elongation factor Tu 1 :EFTU1_ECOHS
2	b		Z 1 (B)	non-polymer(IOD)	IODIDE ION	124E(P) 134R (identity: 50.0 %/35.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5opd_B_1 identity=35.5%

queryA         3:KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNM: 102
                :  *   *   ***** ** * *                      *    *        *         ***  *     *        * *** *  ***:
5opd_B_1       8:RTKXXVNVGTIGHVDHGKTTLTAAITTVL---------------AKTYGGAARXFDQIDNAPEXXXXXITINTSHVEYDTPTRHYAHVDCPGHADYVKNM:  92
SecStr          :   --  EEEESSTTSSHHHHHHHHHHHH---------------HHHSSS   - HHHHS   -----     EEEEEE SS EEEEEE SSHHHHHHHH:    
ExpBur          :ebe--ebbbbbbbeebbbbebbbbbbbbb---------------eeeeeeeee-beebeebee-----eebebbebbbebeebebebbbbeebebbbbbb:    

queryA       103:ITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNML: 202
                :***  * * * * ***  *          ***** **    **   **  ** *           *  * *                    *        :
5opd_B_1      93:ITGAAQMDGAILVVAATDGPMP-------QTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVREL------------------LSQYDF----: 163
SecStr          :HSGGG  SSEEEEEETTT S H-------HHHHHHHHHHHHT   EEEEEE GGG   HHHHHHHHHHHHHH------------------HHHTTS----:    
ExpBur          :beeebebebbbbbbbbeebeee-------bbeebbebbebbebeebbbbbbebeebeeeeebeebbeebeeb------------------beebeb----:    
Contact         :                     b         b                                                                    

queryA       203:EPSANMPWFKGWKVTRKDGNAS-GTTLLEA---LDCILP-PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVT--TEVKSVEMH: 295
                : *    *   *       * *      **    **   * * *  ***  **  **  * * ***  **** *  * *  *       *       *** :
5opd_B_1     164:-PGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMF: 262
SecStr          :- GGGS EEE  HHHHHHT HHHHHHHHHHHHHHHHTS     GGGS  EEE  EEEE SSS EEEEEE  BSEEETT EEEEESSSS EEEEEEEEEET:    
ExpBur          :-ebeebbbbebbbebbeeeeeebbeebeebbeebeeebeeeeeeeeeebbbbbeebeeeeeeebbbebebeebebbeeeebbbbbbeeeeebebebbeee:    

queryA       296:HEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILN: 348
                :   * *   * ***            ** *        *     *   * ** :
5opd_B_1     263:RKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKP--HTKFESEVYILS: 313
SecStr          :TEEESEEETT EEEEEETT  GGG  TT EEESTTS  E--EEEEEEEEEE  :    
ExpBur          :eeebeebeeeeebbbbbeebbeeebeebbbbbeeeebee--eeebebbbbbbe:

Protein Model on 5opd_B_1_Z_1 (TEMPLATE: 5opd )

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