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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(EF1A1_HUMAN) | GC 1 (CZ) | polymer(polypeptide(L)) [374 aa] | ELONGATION FACTOR TU-A :EFTU1_THET8 | |
2 | b | FC 1 (CY) | polymer(polyribonucleotide) | A-SITE TRNA THR | 77L(H) 97D 98F(Y) 100K 101N 254Y(F) 255K(T) 256I 257G(T) 259I(R) 262V 264V(T) 291S(G) 293E 295H 296H(R) 307N 309G 311N(L) 317V(R) 322R 348N(R) 349H 350P(T) 353I(F) 356G 357Y 358A(R) 360V(Q) 362D(Y) 367H(D) 369A(T) 407G(I) 408K 428D(E) 429M(G) 430R(G) (identity: 37.8 %/36.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4v5g_GC_1 identity=36.1% |
queryA 5:KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMIT: 104 :* * * ***** ** * * * * *** ** * * *** * ******: 4v5g_GC_1 10:KPHVNVGTIGHVDHGKTTLTAALTYVA--------------AAENPNVXXXXXXXXXXXXXXXXXXXXXXXXHVEYETAKRHYSHVDCPGHADYIKNMIT: 95 SecStr : EEEEEEE STTSSHHHHHHHHHHHT--------------TTTSS ------------------------ B SS EEEEE STTTHHHHHH: ExpBur :eebbbbbbbbbeebbbeebbebbbebb--------------eeebeee------------------------eeebebeebebbbbebebeeeeeeebbb: Contact : b bb bb queryA 105:GTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEP: 204 :* * * * * * * * ***** *** ** * ** * * ** * ** ** : 4v5g_GC_1 96:GAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVDDP---ELLDLVEMEVRDLLNQYEFPGDE---VPVIRGSALLALEQ: 182 SecStr :HHTT SEEEEEEESSS S H-------HHHHHHHHHHHS B EEES SSS H---HHHHHHHHHHHHHHHTTSS TTS--- EES HHHHTTH: ExpBur :bbebbbbbbbbbbbeebeee-------bbeebbbbbeebebeebbbbbbebeeeeee---ebbeebbeebeebbeeeebebee---bebbebbbeebbee: queryA 205:SANMPWFKGWKVTRKDGNASGTTLLEALDCI---LP-PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFAPVNVTTEVKSVEMHHE: 297 : * ** * * ** * * * * *** * ** * * *** ** * * * * * ** * * **** : 4v5g_GC_1 183:MHRNPK------TRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRK: 276 SecStr :HHHSS ------ S SSGGGGGGHHHHHHTTTTS TTS B B EEE SSS EEEE BSB TTEEEEE SSSSS EEEEEEEEEETTE: ExpBur :beeeee------beeeeeebbeebbebbebbbeebeeeebeeeeebbbbbbebeeeeeeebbbbbbbebbebeeeeebbbbbeeeeeeebebebbebbee: Contact : bbbb b b b b b bb queryA 298:ALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIIL------NHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGP: 391 : * * ***** ** * ** * * * * * * * * * ** * * * * : 4v5g_GC_1 277:TLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITP--HTKFEASVYVLKKEEGGRHTGFFS-GYRPQFYFRTTDVTGVV-------------QLPPGV: 360 SecStr :E SS BTT EEEEETT SSSS SS BEESTTS EE--ES EEEEEEE GGGTS SS T-T EEE TT EE -------------B TT : ExpBur :eeeebebbbbbbbbbeeeeeeebeebbbbbeeebbee--eeebebebebbeeeeebbeebbee-ebebebbbbbbebebeb-------------ebeeee: Contact : b b b b b bbb b bbb b b b b queryA 392:KFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAV: 441 : ** ** * *** * ** ** : 4v5g_GC_1 361:EMVMPGDNVTFTVELIKPVALEEGL------RFAIREGGRTVGAGVVTKI: 404 SecStr : S SS B EEE SS EEE SS ------EEEEE SSSEEEEEEE : ExpBur :eebebeeebebbbebeeebbbeeeb------ebebbeeeebbbebebeeb: Contact : bb bbb |