Protein Model on 4v5g_GC_1_FC_1 (TEMPLATE: 4v5g )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(EF1A1_HUMAN) GC 1 (CZ) polymer(polypeptide(L)) [374 aa] ELONGATION FACTOR TU-A :EFTU1_THET8
2 b FC 1 (CY) polymer(polyribonucleotide) A-SITE TRNA THR 77L(H) 97D 98F(Y) 100K 101N 254Y(F) 255K(T) 256I 257G(T) 259I(R) 262V 264V(T) 291S(G) 293E 295H 296H(R) 307N 309G 311N(L) 317V(R) 322R 348N(R) 349H 350P(T) 353I(F) 356G 357Y 358A(R) 360V(Q) 362D(Y) 367H(D) 369A(T) 407G(I) 408K 428D(E) 429M(G) 430R(G) (identity: 37.8 %/36.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4v5g_GC_1 identity=36.1%
queryA         5:KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMIT: 104
                :* * *   ***** ** * *  * *                ***                                ** *      * *** * ******:
4v5g_GC_1     10:KPHVNVGTIGHVDHGKTTLTAALTYVA--------------AAENPNVXXXXXXXXXXXXXXXXXXXXXXXXHVEYETAKRHYSHVDCPGHADYIKNMIT:  95
SecStr          :  EEEEEEE STTSSHHHHHHHHHHHT--------------TTTSS  ------------------------ B    SS EEEEE    STTTHHHHHH:    
ExpBur          :eebbbbbbbbbeebbbeebbebbbebb--------------eeebeee------------------------eeebebeebebbbbebebeeeeeeebbb:    
Contact         :                                                                        b                   bb bb   

queryA       105:GTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEP: 204
                :*  * * * * * *  *          ***** ***   **    *  ** *    *           **           *    **         ** :
4v5g_GC_1     96:GAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVDDP---ELLDLVEMEVRDLLNQYEFPGDE---VPVIRGSALLALEQ: 182
SecStr          :HHTT SEEEEEEESSS S H-------HHHHHHHHHHHS    B  EEES SSS  H---HHHHHHHHHHHHHHHTTSS TTS---   EES HHHHTTH:    
ExpBur          :bbebbbbbbbbbbbeebeee-------bbeebbbbbeebebeebbbbbbebeeeeee---ebbeebbeebeebbeeeebebee---bebbebbbeebbee:    

queryA       205:SANMPWFKGWKVTRKDGNASGTTLLEALDCI---LP-PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFAPVNVTTEVKSVEMHHE: 297
                :    *       **   *       * ** *    * * *  ***   *  **  * * ***  ** * *  * *     *  **    * *  ****  :
4v5g_GC_1    183:MHRNPK------TRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRRTVVTGVEMHRK: 276
SecStr          :HHHSS ------  S SSGGGGGGHHHHHHTTTTS      TTS  B B  EEE  SSS  EEEE   BSB  TTEEEEE SSSSS EEEEEEEEEETTE:    
ExpBur          :beeeee------beeeeeebbeebbebbebbbeebeeeebeeeeebbbbbbebeeeeeeebbbbbbbebbebeeeeebbbbbeeeeeeebebebbebbee:    
Contact         :                                                     bbbb b  b b                             b b bb 

queryA       298:ALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIIL------NHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGP: 391
                : * *   *****     **   * ** *        *     * * *  *       * *  * ** *     *                     *  * :
4v5g_GC_1    277:TLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITP--HTKFEASVYVLKKEEGGRHTGFFS-GYRPQFYFRTTDVTGVV-------------QLPPGV: 360
SecStr          :E SS BTT  EEEEETT  SSSS SS BEESTTS EE--ES EEEEEEE  GGGTS SS   T-T   EEE TT  EE   -------------B  TT :    
ExpBur          :eeeebebbbbbbbbbeeeeeeebeebbbbbeeebbee--eeebebebebbeeeeebbeebbee-ebebebbbbbbebebeb-------------ebeeee:    
Contact         :         b b b     b    b                               bbb  b  bbb b b    b b                      

queryA       392:KFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAV: 441
                :     **         **   *         *** *    **  **    :
4v5g_GC_1    361:EMVMPGDNVTFTVELIKPVALEEGL------RFAIREGGRTVGAGVVTKI: 404
SecStr          : S  SS B  EEE  SS EEE SS ------EEEEE SSSEEEEEEE   :    
ExpBur          :eebebeeebebbbebeeebbbeeeb------ebebbeeeebbbebebeeb:    
Contact         :               bb                   bbb                                                             


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