[pdbjlvh2]Protein Model on 4cxg_C_1_F

Protein Model on 4cxg_C_1_F_1 (TEMPLATE: 4cxg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(EF1A1_HUMAN)	C 1 (A)	polymer(polypeptide(L)) [427 aa]	ELONGATION FACTOR 1A
2	b		F 1 (a)	polymer(polyribonucleotide)	18S RRNA - H5-H14	35D(E) 37R(K) 38T(K) 256I 257G(P) 258G 259I(A) 260G 290K(R) 313K(R) (identity: 30.0 %/55.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4cxg_C_1 identity=55.7%

queryA         5:KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMIT: 104
                :* * * ******* ****  *** *  * *        *  *   ** *** ** *** * *********    **** **  *********** *****:
4cxg_C_1       4:KPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMIT: 103
SecStr          :  EEEEEEE STTSSHHHHHHHHHHHTT S HHHHHHHHHHHHHTT GGGTTHHHH  SHHHHHHTS  S EEEEEE SS EEEEEE   SGGGHHHHHH:    
ExpBur          :eebbbbbbbbbeebbbbbbbbbbbbeeeebeeeebeebeeebeeeeeeeebbbbbbbeeeebbeebbbbebbeebbebeebebbbbbbbbeeebbebbbb:    
Contact         :                              b bb                                                                  

queryA       105:GTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEP: 204
                :* **** * * * *  ****** *  ****** *** * *  * ** *****     * *****  *       *  **  *   * * * * ***  * :
4cxg_C_1     104:GASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAWKGDNLIER: 203
SecStr          :HHHT SEEEEEEE STTHHHHHTSTT HHHHHHHHHHHTT  EEEEEEE TTSTTTTT HHHHHHHHHHHHHHHHHHT  GGG  EEE  TTT TTTSS :    
ExpBur          :bbbbbbbbbbbbbbeeeebeebbeeebbbebbbbbbebbebeebbbbbbbbbbeebebeeebbeebbeebeebbeeeebebeebebbbbbbeebbbbeee:    

queryA       205:SANMPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALP: 304
                :* ****              * ** ****   **  * ***** * * ** * * *************  *  * * *  *  ** * ***   *  * *:
4cxg_C_1     204:SPNMPWY------------NGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGVVGEVRSIEMHYQQLQQAEP: 291
SecStr          : TT TT ------------ S  HHHHHHTS      TTS  BEE SEEEEETTTEEEEEEE  BS EETT EEEEETTTEEEEEEEEEETTEEESEE T:    
ExpBur          :beebeeb------------eebbbbebbeebeeeeeeeeeebbbbbbebeeeeeeebbbbbbbbbbbbeeebebbbbeeeeebbbebbbbeeeeeeebeb:    
Contact         :                                                   bbbbb                             b              

queryA       305:GDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM: 404
                :*** ** *  **  *  ** ***     **  *  * *      **  *  ** **   ***       * * * *   *   *  * *** ******  :
4cxg_C_1     292:GDNIGFAVRGVSKSDIKRGDVAG-HLDKPPTVAEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQVVEQNPQFLKAGDAAIVRF: 390
SecStr          :T EEEEEEET  GGG  TT EEE-ESSS   EEEEEEEEEEE   SS B TT   EEEETTEEEEEEEEEEEEEE TTT  EEEES S B TT EEEEEE:    
ExpBur          :bbbbbbbbeebeeeebeebbbbb-beeeebebbebbebebebeebeeebeeebebebbbbbbebebebeebebbbeeeeeeeeeeebeebeeebbbebeb:    
Contact         :        b                                                                                           

queryA       405:VPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAV: 441
                : * **  ** **  * ***** ***  **  *    *:
4cxg_C_1     391:KPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDV: 427
SecStr          :EESS EE   TTT GGGSEEEEEETTEEEEEEEEEEE:    
ExpBur          :ebeeebbbbeeeebeebbebbbbeeebbbbebbbeeb:

Protein Model on 4cxg_C_1_F_1 (TEMPLATE: 4cxg )

Input Residue Numbers for Focused Sites