[pdbjlvh2]Protein Model on 5jer_E_1_A

Protein Model on 5jer_E_1_A_1 (TEMPLATE: 5jer )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1] [assembly_id:5]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(IRF3_HUMAN)	E 1 (A)	polymer(polypeptide(L)) [234 aa]	Interferon regulatory factor 3 :IRF3_HUMAN
2	b		A 1 (B)	polymer(polypeptide(L)) [10 aa]	Rotavirus NSP1 peptide	211R 257V 260Y 263H 264V 267C 288H 290H 292Y 349G 350E 351S 360K 362L (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5jer_E_1 identity=100.0%

queryA       189:ENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGH: 288
                :****************************************************************************************************:
5jer_E_1       4:ENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGH: 103
SecStr          :  GGGGGGSTT  B EEEEEESSSSEEEEEEE  TT EEEE  S   TTSSSEEEE       SSS TTHHHHHHHHTT TT EEEEEETTEEEEEE SS:    
ExpBur          :ebebeebeeeebebebbbbbbbeeeeebeeebebeebbbbbeeeeeeeeeebeebebeeeeeeeeeeeebeebeebbeebebbbbbebeebebebbbebe:    
Contact         :                      b                                             b  b  bb  b                    b

queryA       289:CHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGASSLE: 388
                :****************************************************************************************************:
5jer_E_1     104:CHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEMARVGGASSLE: 203
SecStr          :  EEEEEE SS S  SS  SEE  SSS EEEEEHHHHHHHHHHHHTTSS     EEEEEESS   TTS GGGSSEEEEEEEHHHHHHHHHHHHSTTSS E:    
ExpBur          :bebebbebeeeebbeeebeeeebeeeeebebbbbbebbeebbeebeeeeebbebbbbbbbeeebbeeeebeebbbbbbbbbbbbebbbebbeebeeeeee:    
Contact         : b b                                                        bbb        b b                          

queryA       389:NTVDLHISNSHPLSLTSDQYKAYLQDLVEGMDFQ: 422
                :**********************************:
5jer_E_1     204:NTVDLHISNSHPLSLTSDQYKAYLQDLVEGMDFQ: 237
SecStr          :EEE   BSS   EEEEHHHHHHHHHHHHTTS   :    
ExpBur          :eebebebbeeeebebbbeebeeebeebbeebeee:

Protein Model on 5jer_E_1_A_1 (TEMPLATE: 5jer )

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