Protein Model on 8tcf_A_1_D_1
(TEMPLATE: 
8tcf
)Protein Model on 8tcf_A_1_D_1
(TEMPLATE: 8tcf
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [444 aa] | Integrin alpha-V heavy chain :ITAV_HUMAN | |
| 2 | b | D 1 (D) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 434L(Y) 447Q(S) 448V(L) 449Q(Y) 450T(N) (identity: 0.0 %/38.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8tcf_A_1 identity=38.5% |
queryA 403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
:**** * ** ** * * * * * * *** * * ****** * * *:
8tcf_A_1 221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315
SecStr : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT EEEEEE SSTTS TTSSEEEE SSSSSS EEE-EEETT EEE TTS EEE EE:
ExpBur :ebbebbbbbebeeeeebbbbbbbbebeeeebbbbbbb----beebeeeeebebeeeebebbebbbbbbbbebeebbbb-bbbbebeeeeeeeeeebbbbb:
Contact : b bbbb
queryA 495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW---------FG: 582
: * * * * *** ** * * ** * * ** * ******* ** *** ** ** **:
8tcf_A_1 316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSGCPPSFG: 406
SecStr :EEEEE TTS EEEEEEE SSTT--S TTSEEEEEESTT SSS EEEEEETT SGGG EEEEE TTS SS SEEEE ------- SSSS TT:
ExpBur :bbbbbeeeeeeeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbebeeeeebbbbbbbbeeebbeeeeebebeb-------ebeeeeeeebbbb:
queryA 583:RSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVV: 616
: * * * * * *** * *** :
8tcf_A_1 407:YSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVI: 442
SecStr :SSEEEEE SSSSSS EEEEEEGGGTEEEEE B :
ExpBur :ebbebebebeeeebbbbbbbbbbbbebbbbebeeee:
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[assembly_id:1]
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