[pdbjlvh2]Protein Model on 8ij5_B_1_A

Protein Model on 8ij5_B_1_A_1 (TEMPLATE: 8ij5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	B 1 (E)	polymer(polypeptide(L)) [520 aa]	Integrin alpha-V heavy chain :ITAV_HUMAN
2	b		A 1 (B)	polymer(polypeptide(L)) [358 aa]	Integrin beta-3 :ITB3_HUMAN	403Y 406Y 426R 428Q(R) 429H(T) 456I(M) 457G(A) 459Y 462G(F) 483P 484L 486Y(M) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) (identity: 41.2 %/38.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8ij5_B_1 identity=38.5%

queryA       403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
                :**** *              ** **     * *        *   *      * *   ***      *   *       ******         *  * *:
8ij5_B_1     221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315
SecStr          : TTSSEEEE  SSSSS EEEEEETT SSSS EEEE  ----SSS    EEEE SSTTS TTSEEEEE SS SSS EEE-EEETT EEE SSS EEE BEE:    
ExpBur          :ebbebbbebebeeeeebbbbbbbbebeebebebbbbb----beebeeeeebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebeeeeeeeeeebbbbb:    
Contact         :b  b                    b  bb                          bb b  b                    bb b         b    

queryA       495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGR: 583
                :     *  *      * *       *** **  * *   **  * *  **       * *******  **   ***  **       **        ** :
8ij5_B_1     316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGY: 406
SecStr          :EEEEE TTS EEEEEEE SSTT--  BSSEEEEEE SS SSS EEEEEETT SSTT  EEEEEEEETTEE SS SEEEE ------- S   SS   EEE:    
ExpBur          :bbbbbeeebebeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbebbeeebbbbbbbbbeeebbeeeebbebeb-------eeeeeeeebbbbe:    
Contact         :                     b   b                        b                                           b    b

queryA       584:SIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVV: 616
                :*  *  *    *  *  ***      *    *** :
8ij5_B_1     407:SMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVI: 441
SecStr          :EEEEEE SS SSS EEEEEETTTTEEEEEEB  EE:    
ExpBur          :bbbbeeebbebebbbbbbbbbbbbebbbbbbbbbb:

Protein Model on 8ij5_B_1_A_1 (TEMPLATE: 8ij5 )

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