[pdbjlvh2]Protein Model on 7y1t_A_1_B

Protein Model on 7y1t_A_1_B_1 (TEMPLATE: 7y1t )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [534 aa]	Integrin alpha-V :ITAV_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [345 aa]	Integrin beta-8 :ITB8_HUMAN	403Y 406Y 426R 428Q(R) 429H(T) 455Q 456I(M) 457G(A) 459Y 484L 486Y(M) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) (identity: 43.8 %/33.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7y1t_A_1 identity=33.3%

queryA       403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
                :**** *              ** **     * *        *   *      * *   ***      *   *       ******         *  * *:
7y1t_A_1     251:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 345
SecStr          : BTSSEEEE SS SSS EEEEEESSHHHHT EEEEE ----TTT     EEE SSTT  TTSEEEEE SSSSS  EEE-EEESS EEE SS  EEE  EE:    
ExpBur          :ebbebbbbbebeeeeeebbbbbbbebeeeebbbbbbb----beebeeeeebebebeebebbebbbbbbbbeeeebbbb-bbbbbbeeeeeebeeebbbbb:    
Contact         :b  b                    b  bb                         bbb b                        b b   bb bb b    

queryA       495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW---------FG: 582
                :     *  *      * *       *** **  * *   **  * *  **       * *******  **   ***  **       **         **:
7y1t_A_1     346:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSGCPPSFG: 436
SecStr          :EEEEE SS  EEEEEEE SSTT--  TTSEEEEEESSS SSS EEEEEETT TTTT  EEEEE   SSS  SS SEEEE -------    SSSS   TT:    
ExpBur          :bbbbbeeebeeeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbbbbeeeebbbbbbbbeeebbeeeebbebeb-------eeeeeeeebbbbb:    
Contact         :                     b   b                        b                                           bb    

queryA       583:RSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQ: 662
                : *  *  *    *  *  ***      *    ***          *                      *   *     *   * :
7y1t_A_1     437:YSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSIXXXXXXXXXXXXXXXXXXXFNVRFCLKADGKGVLPR: 520
SecStr          :SEEEEEE SSSSSS EEEEEETTTTEEEEE B  EEEEEEEEEESS  -------------------  EEEEEEEEESSS  S:    
ExpBur          :eebebeeebbebebbbbbbbbbebbebbbbbbbbbbebeeeeeeeeee-------------------eeeebbbbbebeeebee:    
Contact         :b                    b

Protein Model on 7y1t_A_1_B_1 (TEMPLATE: 7y1t )

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