[pdbjlvh2]Protein Model on 7ukp_A_1_V

Protein Model on 7ukp_A_1_V_1 (TEMPLATE: 7ukp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(ITAL_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [454 aa]	Integrin alpha-IIb heavy chain :ITA2B_HUMAN
2	b		V 1 (B)	non-polymer(NJ9)	3-(4-{[(5S)-3-(4-carbamimidoylphenyl)-2-oxo-1,3-oxazolidin-5-yl]methyl}piperazin-1-yl)propanoic acid	400R(F) (identity: 0.0 %/38.3 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7ukp_A_1 identity=38.3%

queryA       396:TPEVRAGYLGYTVTW--LPSRQKTSLLASGAPRYQH-MGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRG-: 491
                : **   ** ** *          *     ***      * *                   * *  ****      **  **   **  **** * * *  :
7ukp_A_1     227:NPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDS-----YYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLL-VGAPL-YMESRAD: 319
SecStr          : GGGTT  TTSEEEEE  SS TTS EEEEEETTHHHHT EEEEE T-----T  EEEEEE SSTTS TTSEEEEE  SSSSS EEE-EEETT- EEE GG:    
ExpBur          :eeebeebebbebbbebbbeeeeeeebbbbbbbbbbeebbbbbbbee-----ebeeeebbebeeeebebbbbbbbbbbbeeebebbb-bbbbe-beeeeee:    
Contact         :    b                                                                                               

queryA       492:------GRVFIYQR----RQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI: 578
                :      ***           **      * *   *  **** **  * *   **  * ** **       * *  * *   **   ***         * :
7ukp_A_1     320:RKLAEVGRVYLFLQPRGPHALGAPSLL-LTGTQLY--GRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLD-SPFPTGS: 415
SecStr          :G EEE  EEEEE   SSS    S SEE-EE  STT--  TTS EEEEE SSSSSS EEEEEETT STTSS EEEEE EETTEE SS SEEEE-  S TT :    
ExpBur          :eeebebbbbbbbebeeeeeebeeeeee-bebeeee--bebbbbbbebbbbbeeeeebbbbbbbebbeeeebbbbbbbbeeebbeeeeebebe-bebeeeb:    

queryA       579:QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVV: 616
                :  ** *  *  *    *  *  ***    *  *    ***:
7ukp_A_1     416:A-FGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQPVV: 454
SecStr          : -TTSEEEEEE SS SSS EEEEEETTTTEEEEE B    :    
ExpBur          :b-bbebbebebebeeeeebbbbbbbbeebebbbbbbeeee:

Protein Model on 7ukp_A_1_V_1 (TEMPLATE: 7ukp )

Input Residue Numbers for Focused Sites