Protein Model on 7p2d_A_1_B_1
(TEMPLATE: 
7p2d
)Protein Model on 7p2d_A_1_B_1
(TEMPLATE: 7p2d
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [751 aa] | Isoform 2 of Integrin alpha-M :ITAM_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [459 aa] | Integrin beta :A0A494C0X7_HUMAN | 47Y(Q) 62G(Q) 114G(T) 116S(H) 119C 121Q(E) 122N 123T 125L(V) 345F 349L(M) 351S(Q) 354I(F) 368V 373W 401A(D) 403Y 406Y 426R 429H 455Q 456I 457G 459Y 484L(H) 486Y 518L(W) 520R 580W(Y) 683R(H) (identity: 53.3 %/39.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7p2d_A_1 identity=39.8% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQV-GNGVIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * * * ** * * * * **** * * ****** ** * * * ** ** *** * ** :
7p2d_A_1 1:FNLDTENAMTFQ--ENARGFGQSVVQLQGSRVVVGAPQEIVAANQRGSLYQCDYSTGSCEPIRLQVPVEAVNMSLGLSLAATTSPPQLLACGPTVHQTCS: 98
SecStr : B STT EEEE-- S TTTTS EEE SSSEEEEEETT SSTT EEEEEESSS SEEE TT BT TTSEEEEETTTTEEEEEEEEEEEEET:
ExpBur :bbbbeeeeeebe--eebebbbebbbbbeebbbbbbbbeeeeeeeeebbbbebebeeeebeebeeebeeebeebbbbebbbebeeeeebbbbbbbbebebe:
Contact : b b b b b
queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
: *** *** ** ** * * ** *** * * * * ** * * * * * * * *:
7p2d_A_1 99:ENTYVKGLCFLFGSNLRQQPQKFPEALRGCPQEDSDIAFLIDGSGSIIPHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEEFRIHFTFKEFQNNPNPRSL: 198
SecStr :TEEEEEEEEEEE S SSS EEESSS SEEEEEEEE TTS HHHHHHHHHHHHHHHHHH SSSEEEEEEEESSSEEEEE HHHHHHS HHHH:
ExpBur :eeebbbbbbbbbeeebeeeeeebbeebeeeeeeebbbbbbbbbbeebeeebbeebbebbbbbbeebeeeebbbbbbbbbeebeeebbbeebeeeeebeeb:
Contact :bbb b
queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDS--GNIDAAKD-----IIRYIIGIGKHFQTKESQETLHKFASKPASEFVKI: 313
: * * * * * * * ** *** * * * ***** * * *** ** * * * * **** * :
7p2d_A_1 199:VKPITQLLGRTHTATGIRKVVRELFRITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQ: 298
SecStr :HTT S HHHHHHHHHHTTS GGGT TTSEEEEEEEE S S SS HHHHHHHHHHTT EEEEEEESGGGSSHHHHHHHHHHS SSHHHHEEE:
ExpBur :beebeeeeeebbbbbbbbebbeebbeeeebbeeebbbbbbbbbbbeeeebeeebeebbeebeeeebebbbbbbbeebeeeebeeebbebbbeeeeebbeb:
queryA 314:LDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPS: 413
: ** ** * ** **** ** * * * ** ** ***** * *** **** :
7p2d_A_1 299:VNNFEALKTIQNQLREKIFAIEGTQTGSSSSFEHEMSQEGFSAAITSNGPLLSTVGSYDWAGGVF-LYTSKEKSTFINMTRVDSDMNDAYLGYAAAII-L: 396
SecStr :ESSGGGHHHHHHHHHHHHHHHH SS SS SSS EEEEEEE SSSEEEEETTSTTTTBEEE-E SSSSS B S STTTTT BTSSEEEE-E:
ExpBur :beebebbeebbeebeeebeeeebeeeeeeeeeebebbebbebbbbbeebbbbbbbbbebebbbbb-bbeeeeeeeebebeeeeeebeebebbebbbeb-e:
Contact : b b b b b b b b b
queryA 414:RQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIY-----QRRQLGFEEVS: 508
:* * ******* * * * * * * ***** *** ** **** * * * ***** * *** * ** * :
7p2d_A_1 397:RNRVQSLVLGAPRYQHIGLVAMFR--QNTGMWESNANVKGTQIGAYFGASLCSVDVDSNGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGQRARWQCDAV-: 493
SecStr :ETTEEEEEEEEEEETTEEEEEEEE--EETTEEEEEEEEE STTS TTSEEEEE SS SS EEEEEETT BTTB BEEEEEE SS EE-:
ExpBur :eeeeebbbbbbbebeeebbbbbbe--eeeeebeeebebeeeeeebebbbbbbebbbeeebbbebbbbbbbebebeebbbbbbbbebeeeeeeebeeeee-:
Contact : b b bbb b b b
queryA 509:ELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEE--QGAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAES: 605
: * * * * **** * * * * *** * *** *** ** **** * * * * ** **** * * ** * * ** *** * *** :
7p2d_A_1 494:-LYGEQGQPWGRFGAALTVLGDVNGDKLTDVAIGAPGEEDNRGAVYLFHGTSGSGISPSHSQRIAGSKLSPRLQYFGQSLSGGQDLTMDGLVDLTVGAQG: 592
SecStr :-E TT TT BTSEEEEEE SSSSSS EEEEEETTHHHH EEEEE EETTTEE SS SEEEEHHHH TT STTSEEEESS SSSSS EEEE SS:
ExpBur :-bebeeebeebebbebbbebeebbeeebbbbbbbbbbbeeeebbbbbbbbeeeeebeeeeebbbbbeeeeeebeebbebbbbeeebbebebebbbbbbee:
Contact : b b b
queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI-KSLIPQF-QGRLVANLTYTLQLDGHRTRRRGLFPGGRHELRRNIAVT-: 702
: * * ** * * * * ** * ** * ** * ** * ** * * * ** * :
7p2d_A_1 593:HVLLLRSQPVLRVKAIMEFNPREVARNVFECNDQVV-KGKEAGEVRVCLHVQKSTRDRLREGQIQSVVTYDLALDSGRPHSRAVFNETKRSTRRQTQVLG: 691
SecStr :EEEEE B EEEEEEEEE TT S TTS SS - EES B EEEEEEEESS SS SS EEEEEEEEESTTSSS S EETTTSSS EEEEEEE :
ExpBur :bbbbbbbbbbbebebebebeeeeeeeeebeeeeeee-eeeeeeebebbbebebebebebeeeebebebebbbebbeeeeeebbebeeeeeeeeebeeebe:
Contact : b
queryA 703:TSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTP: 740
: * * * * *** ***** ***:
7p2d_A_1 692:LTQTCETLKLQLPNCIEDPVSPIVLRLNFSLV---GTP: 726
SecStr :SS EEE BEEEESS S S S EEEEEE EE---E :
ExpBur :eeeeeeebebeeebeeeeeeeebebebebebe---bee:
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[assembly_id:1]
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