Protein Model on 7nxd_A_1_V_1 (TEMPLATE: 7nxd )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [905 aa] Integrin alpha-5 :ITA5_HUMAN
2 b V 1 (A) non-polymer(NAG) 2-acetamido-2-deoxy-beta-D-glucopyranose 625S(F) 635E(S) 647G(C) 649N 709D(E) (identity: 20.0 %/32.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7nxd_A_1 identity=32.2%
queryA       353:GISADLSR-GHAVVGAVGAKDWAGGFLDLKADLQDDTF--------IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAPRYQ-HMGRVLLFQ: 437
                :* **     *  * *  *   * *  *                         *          **** *     *   *     * *      * *    :
7nxd_A_1     167:GFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQIAESYYPEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTYGYVTILN: 266
SecStr          :TSEEEE TT  EEEEESSHHHHTBEEEEE HHHHHHH  SS SS   TT EE     GGG S  BTSEEEEE SS SSS EEEEE SSHHHHT EEEEEE:    
ExpBur          :bebbebbeebebbbbbbbbeeebbbbbbbbeeebbebeeeeeeeeebeeeeebeeeeeeeeebebbebbbebbbeeeeebbbbbbbbebeeeebebbbbb:    

queryA       438:EPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDI: 531
                :    *          * *  ****      **  **   **  ****          *  ***  *     * *    *        ****   * * * :
7nxd_A_1     267:----GSDIRSLYNFSGEQMASYFGYAVAATDVNGDGLDDLL-VGAPLLMDRTPDGRPQEVGRVYVYLQHPAGIEPTPTLTLTGHDEFGRFGSSLTPLGDL: 361
SecStr          :----TTTTEEEEEEE SSTT  TTSEEEEE SSSSSS EEE-EEETT  EE TT  EE   EEEEE   SS   SS SEEEE  STT  TTSEEEE   S:    
ExpBur          :----beebeeeeebebeeeebbbbebbbbbbbbeeeeebbb-bbbbebebeeeeeeebbbbebbbbbbeeeeeeeeeebebebeeeebebbbebbebebb:    

queryA       532:NGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGI-QWFGRSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFS: 625
                :  **  *** ***      ** *  * *  ***   ***        *     **    *  ** * *  *  **        *   ** *         :
7nxd_A_1     362:DQDGYNDVAIGAPFGGETQQGVVFVFPGGPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKAVVYRGRPIVSASASLTIF: 461
SecStr          :S SSS  EEEEETT SSS  BEEEEE   SSS  SS SEEE  SS   SS   BTSEEEES  SS SSS  EEEEETTTTEEEEE B  EEEEEEEEE T:    
ExpBur          :beeeeebbbbbbbebeeeebbbbebbebbeeebeeeeebebebebeeeeeebebbbbbbbeeebeebebbbbbbbbbebbebbbbebebbbebebebebe:    
Contact         :                                                                                                   b

queryA       626:PAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVAN---LTYTLQLDGHRTR---RRGLFPGGRHE-LRRNIAVTTSM--SCTDFSFHF--: 714
                :**     *  *  *         *   *           *  **     *  ****        ** **   *   *             *         :
7nxd_A_1     462:PAMFNPEERSC--SLEGNPVACINLSFCLNAS-------GKHVADSIGFTVELQLDWQKQKGGVRRALFLASRQATLTQTLLIQNGAREDCREMKIYLRN: 552
SecStr          :T  B TTS SS--B SS B  EEEEEEEEEEE------- SS  SEE EEEEEEESGGGTTTS   EEETTTTBS EEEE  EESSS  EEEEEEEEE  :    
ExpBur          :eeebbeeeeeb--eeeeeebbbbebbbbbebe-------eeeeeeebebebebbbbeebeeeeeebbbbeeeeebeeeeebebeeeeeeeeeebebbbee:    
Contact         :         b           b b                                                                    b       

queryA       715:PVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPILRPSLHSETWEIPFEK-----NCGEDKKCEANLRVSFSPARSRALRLTAFASLSVELSLSN: 809
                :     *  ***   *****      * *           *** **         *      ****  *   *             *     *       *:
7nxd_A_1     553:ESEFRDKLSPIHIALNFSL--DPQAPVDSHG--------LRPALHYQSKSRIEDKAQILLDCGEDNICVPDLQLEVF-GEQNHVYLGDKNALNLTFHAQN: 641
SecStr          :SS  S   S EEEEEE EE-- SS    SS --------   EE SSS  EEEEEE B  S  TT      EEEEEE-EES  B TTS  EEEEEEEEEE:    
ExpBur          :eeebeeeeeebbbbbebee--eeeeeeeeee--------beebebeeeeeeeeeebeebeebeeebebebebebebe-beeeebebbeebebebbbebeb:    

queryA       810:L-EEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSV----------------ALQMMFNTL---VNSSWG: 889
                :  *  **   *    **           *      **          ** * *    *  *** *                   *  *  *    * *  :
7nxd_A_1     642:VGEGGAYEAELRVTAPPEAEYSGL-VRHPGNFSSLSCDYFAVNQ---SRLLVCDLGNPM-KAGASLWGGLRFTVPHLRDTKKTIQFDFQILSKNLNNSQS: 736
SecStr          : S S  TTEEEEEE  SS EEEEE-EE  SS SS  EEEETTSS---S EEEEEEESS - TT EEEEEEEEE    TT  S EEEEEEEE   SSS S :    
ExpBur          :ebebbbeebbbebebbebbeeeeb-ebebeeeeebebeeeeeee---eebbbbebeeeb-eeeeebebbbebebeebeeeeeebebebebbbebeeeeeb:    

queryA       890:D------SVELHANVTCN: 901
                :*      ***  * ** *:
7nxd_A_1     737:DVVSFRLSVEAQAQVTLN: 754
SecStr          :  EEEEE B     EEEE:    
ExpBur          :eeeebebebebebebebe:

Input Residue Numbers for Focused Sites

ex) 2,15,123