Protein Model on 6ujc_A_1_E_1
(TEMPLATE: 
6ujc
)Protein Model on 6ujc_A_1_E_1
(TEMPLATE: 6ujc
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [593 aa] | Integrin alpha-V :ITAV_HUMAN | |
| 2 | b | E 1 (C) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 434L(Y) 447Q(S) 448V(L) 449Q(Y) 450T(N) (identity: 0.0 %/32.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6ujc_A_1 identity=32.4% |
queryA 403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
:**** * ** ** * * * * * * *** * * ****** * * *:
6ujc_A_1 221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315
SecStr : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT EEEEEE SSTTS TTSSEEEE SSSSSS EEE-EEETT EEE TTS EEE EE:
ExpBur :ebbebbbbbebeeeeebbbbbbbbebeeeebbbbbbb----beebeeeeebebeeeebebbebbbbbbbbebeebbbb-bbbbebeeeeeeeeeebbbbb:
Contact : b bbbb
queryA 495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGR: 583
: * * * * *** ** * * ** * * ** * ******* ** *** ** ** ** :
6ujc_A_1 316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGY: 406
SecStr :EEEEE TTS EEEEEEE SSTT--S TTSEEEEEESTT SSS EEEEEETT SGGG EEEEE TTS SS SEEEE ------- S SSS TTS:
ExpBur :bbbbbeeeeebeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbebeeeebbbbbbbbbeeebbbeeeebebeb-------ebeeeeeebbbbe:
queryA 584:SIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDG: 679
:* * * * * *** * *** * ** * * * * * * ** :
6ujc_A_1 407:SMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDK: 501
SecStr :SEEEEE SS SSS EEEEEEGGGTEEEEEEE EEEEEEEEEEESSEE SS EE SSS EE EEEEEEEEEEE SS S-----EEEEEEEEEES :
ExpBur :ebebebebbebebbbbbbbbbbbbebbbbbbbbbbebebebeebeeeebeeeeeeeeeeeeeeebebbbebbbebeeeeebee-----ebbbbbebebbe:
queryA 680:HRTR---RRGLFPGGR---HELRRNIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSL: 733
: ** ** * * * * * * ** *:
6ujc_A_1 502:LKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL: 563
SecStr : S TTS EEETTTTBSEEEEEEEEETTS EEEEEEEEE TTS S S EEEEEEEEEE:
ExpBur :eeeeeeeeebbbeeeeeeeeeeebebebeeeeeeeeeebbebeeeeeeeeeeebebebebeb:
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[assembly_id:1]
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