Protein Model on 6om1_A_1_B_1 (TEMPLATE: 6om1 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [592 aa] Integrin alpha-V :ITAV_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [333 aa] Integrin beta-8 :ITB8_HUMAN 403Y 406Y 426R 428Q(R) 429H(T) 455Q 456I(M) 457G(A) 459Y 462G(F) 484L 486Y(M) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) (identity: 41.2 %/32.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6om1_A_1 identity=32.4%
queryA       403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
                :**** *              ** **     * *        *   *      * *   ***      *   *       ******         *  * *:
6om1_A_1     221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315
SecStr          : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT  EEEEEE SSTTS TTSSEEEE SSSSSS EEE-EEETT EEE TT  EEE  EE:    
ExpBur          :ebbebbbebebeeeeebbbbbbbbebeeeebbbbbbb----beebeeeeebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebeeeeeeeeeebbbbb:    
Contact         :b  b                    b  bb                         bbb b  b                     b b   bbbbb b    

queryA       495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW---------FG: 582
                :     *  *      * *       *** **  * *   **  * *  **       * *******  **   ***  **       **         **:
6om1_A_1     316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSGCPPSFG: 406
SecStr          :EEEEE TTSSEEEEEEE SSTT--S TTS EEEEESSS SSS EEEEEETT SGGG  EEEEEEEETTEE SS SEEEE -------    SSSS   TT:    
ExpBur          :bbbbbeeeeebeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbbbeeeeebbbbbbbbeeebbeeebbbebeb-------ebeeeeeeebbbb:    
Contact         :                     b   b                        b                                           b     

queryA       583:RSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLD: 678
                : *  *  *    *  *  ***      *    ***          *         **           *   *     *   *        *    * **:
6om1_A_1     407:YSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPXXXLKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLD: 501
SecStr          :SEEEEEE SS SSS EEEEEEGGGTEEEEE B  EEEEEEEEEEESSEE TTT  EE  --- EE EEEEEEEEEEEESSS  S-----EEEEEEEEEE :    
ExpBur          :ebbebebebbebebbbbbbbbbbbbbbbbbbbbbbbebebbbebeeeebebeeeebebe---eebbbbebebbbebebeeebee-----ebebebebebb:    
Contact         :b                    b                                                                              

queryA       679:GHRTR---RRGLFPGGR---HELRRNIAVTTSMSCTDFSFHFPV--CVQDLISPINVSLNFSL: 733
                :        ** **   *   *     *     * *              *   **       *:
6om1_A_1     502:KLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLXXESEFRDKLTPITIFMEYRL: 564
SecStr          : SS TTS    EETTT SSEEEEEEEEEBTS  EEEEEEEE -- TT    SS EEEEEEEEE:    
ExpBur          :eebeeeeeebbebbeeeeeebeeebebeeeeeeeeeebebbb--eeebeeeeeebbbbbebeb:

Input Residue Numbers for Focused Sites

ex) 2,15,123