Protein Model on 6mk0_A_1_B_1
(TEMPLATE: 
6mk0
)Protein Model on 6mk0_A_1_B_1
(TEMPLATE: 6mk0
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [920 aa] | Integrin alpha-V :ITAV_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [687 aa] | Integrin beta-3 :ITB3_HUMAN | 349L(F) 351S(Q) 354I(F) 368V(P) 372D(Y) 373W 403Y 406Y 426R 428Q(R) 429H(T) 455Q 456I(M) 457G(A) 459Y 462G(F) 484L 486Y(M) 488E(R) 490R(E) 516Y(F) 520R 545L(Y) 583R(Y) 679G(K) 680H(L) 681R(K) 717C(E) 719Q(R) 720D 723S(T) 828S(D) 830R(I) 835L(R) 844S (identity: 28.6 %/29.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6mk0_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425
:** * * * * * * * * * * * **** * ** *:
6mk0_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244
SecStr :S STTTTTT TTSEEEE SSSEEEEEETTHHHHTBEEEEEEHHHHHHT TT SS TT EE GGGTT BTSEEEEE STT S EEEEEET:
ExpBur :eebebebbbebbbbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeeeeebeeebebeeeeeeeeebebbebbbbbebeeeeebbbbbbbb:
Contact : b b b b bb bb b b
queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518
:* * * * * * * *** * * ****** * * * * * * * :
6mk0_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337
SecStr :THHHHT EEEEE ----TTT EEEEEE SSTTS TTSEEEEE TTSSSS EEE-EEETT EEE SSS EEE EEEEEEEETTEEEEEEEEE SSTT--:
ExpBur :ebeeeebbbbbbb----beebeeeeebebebeebebbbbbbbbbbbeeeebbbb-bbbbebebeeeeeeeebbbbbbbbbbeeebebeeeebebeeee--:
Contact :b bb bbb b b b b bbbbbbb b b
queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605
: *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** :
6mk0_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430
SecStr :S GGGEEEE S SS SSS EEEEETT TGGG EEEEE EETTEE SS SEEEE ------- SSS TTSEEEEEE SSSSSS EEEEE SSSS:
ExpBur :bebbbbbbebbbbbeeeeebbbbbbbbbeeeebbbbbbbbbeeebbbeeebbebeb-------eeeeeeeebbbbebbebebebbebebbbbbbbbbbbb:
Contact : b b bb b b
queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697
: * *** * ** * * * * * * ** ** ** * * :
6mk0_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525
SecStr :EEEEE B EEEEE EEEE SEE TT EE SSSS EE EEEEEEEEEEE SSS S-----EEEEEEEEEESSSS SSS EEETTT SSEEEEEE:
ExpBur :bbbbbbbbbbbebebebebeeeebebeeeebebeeeeeebbbbebebbbebebeeebee-----ebbbebebbbbeeeeeeeeebbbbbeeeeeeeeeeb:
Contact : bbb b
queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * * ** * * * * *** * * * **** * * ** :
6mk0_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614
SecStr :EEESSS EEEEEEEEE TTSS SS EEEEEEEEE-------- TT TTTS EE SS SEEEEEEEE S-- TTTTS EEEEE - :
ExpBur :ebeeeeeeeeeebebbbeeeeebeeeeebbbbbbebee--------eeebeeebeebebebeeeeeeebeeebbbbee--beeeeebebebebebe-eee:
Contact : b bb b
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * * * ** * * * * *** * * :
6mk0_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709
SecStr : EEETTS EEEEEEEEEE SS BTTEEEEEE TT B- S SSS EEEE SS--- EEEEEEETTB- SEEEEEEEEEEE TTT :
ExpBur :eebebeeebebbbebebbbeeebbbebebbbebbebbebeeb-beeeeebeebebeeeeeee---eeebebebeebb-eeeeeeebbbebbbeeeeeeee:
Contact : b b b b
queryA 891:SVELHANVTCNN: 902
:** *:
6mk0_A_1 710:SVKFDLQIQSSN: 721
SecStr :EE EEEEE S :
ExpBur :ebebebebebeb:
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[assembly_id:1]
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