Protein Model on 5ffg_A_1_G_1
(TEMPLATE: 
5ffg
)Protein Model on 5ffg_A_1_G_1
(TEMPLATE: 5ffg
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [591 aa] | Integrin alpha-V :ITAV_HUMAN | |
| 2 | b | G 1 (G) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 694E(S) 696R(N) (identity: 0.0 %/32.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5ffg_A_1 identity=32.4% |
queryA 403:YLGYTVTWLP-SRQKTSLLASGAPRY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRV: 494
:**** * ** ** * * * * * * *** * * ****** * * *:
5ffg_A_1 221:YLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQV: 315
SecStr : BTSEEEEE SSSSSS EEEEEETTHHHHT EEEEE ----TTT EEEEEE SSTTS TTSEEEEE SSSS EEE-EEETT EEE TTS EEE EE:
ExpBur :ebbbbbbbbebeeeeebbbbbbbbebeebebbbbbbb----beebeeeeebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebebeeeeeeeebbbbb:
queryA 495:FIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW---------FG: 582
: * * * * *** ** * * ** * * ** * ******* ** *** ** ** **:
5ffg_A_1 316:SVSLQRASGDFQTTKLNGFEVF--ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSGCPPSFG: 406
SecStr :EEEEE TTS EEEEEEE SSTT--S TTSEEEEEE TT SSS EEEEEETT SGGG EEEEEEEETTEE SS SEEEE ------- SSS TT:
ExpBur :bbbbbeeebebeeeebebeeee--bebbbbbbebbbbbeeeeebbbbbbbbbbeeebbbbbbbbbeeebbbeeeebebeb-------ebeeeeeeebbbb:
queryA 583:RSIHGVKDLEGDGLADVAVGA--ESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLD: 678
: * * * * * *** * *** * ** * * * * * * **:
5ffg_A_1 407:YSMKGATDIDKNGYPDLIVGAFGVDRAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLD: 501
SecStr :SEEEEEE TT SSS EEEEEEGGGTEEEEE B EEEEEEEEEEESSEE TT SB TTSS B EEEEEEEEEEE SSS S-----EEEEEEEEEET:
ExpBur :ebbebebebbebebbbbbbbbbbbbebbbbbbbbbbebeeebebeeeebebeeeebebeeeeeebbbbebebbbebebeeebee-----ebebebebbbb:
queryA 679:GHRTR---RRGLFPGGR---HELRRNIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSL: 733
: ** ** * * * * * * ** *:
5ffg_A_1 502:KLKQKGAIRRALFLYSRSPSHSKNMTISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL: 564
SecStr :TT TT EEETTTSSSEEEEEEEEETTS EEEEEEEEE GGG SS EEEEEEEEE:
ExpBur :eeeeeeeeebbbbbeeeeeeeeeebebebeeeeeebebebbbeeeeebeeeeeebbbbbebeb:
Contact : b b
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[assembly_id:1]
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