Protein Model on 5e6r_A_1_B_1
(TEMPLATE: 
5e6r
)Protein Model on 5e6r_A_1_B_1
(TEMPLATE: 5e6r
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [581 aa] | Integrin alpha-L :ITAL_HUMAN | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [454 aa] | Integrin beta-2 :ITB2_HUMAN | 43R 44H 47Y 48R 61P 63E 93K 94Y 97M 118T 120D 121Q 123T 341D 345F 349L 354I 368V 373W 403Y 406Y 426R 429H 430M 455Q 456I 457G 459Y 484L 486Y 518L 520R 580W (identity: 100.0 %/98.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5e6r_A_1 identity=98.3% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYL: 125
:****************************************************************************************************:
5e6r_A_1 1:YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYL: 100
SecStr : B GGG EEE TT TTTTSEEEEETTEEEEEE TT EEEEEETTT EEE TT TTTTSEEEE TTT EEEEEEEEEEEETTEEEE:
ExpBur :ebbebeeeeebebeeeeeebbeebbbeeebbbbbbbbeeeeebebbbbeeeeeebeebebeeeeeebeebbbbbbbbeeeebbbbbbbbbebebeebebe:
Contact : bb bb b b bb b b bb b
queryA 126:SGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVK: 225
:**************************************************************************************** ***********:
5e6r_A_1 101:SGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVK: 200
SecStr :EEEEEEESS TTS EEEE TT SSEEEEEEEE BTTS HHHHHHHHHHHHHHHHHHTTSSEEEEEEEESSSEEEEE HHHHHTT HHHHSTT :
ExpBur :bbbbbbbeeebebebeebebbbeeebeeebbbbbbbbbbeebeeeebebbbebbbebbeebeeeebebbbbbbbeeeeebbbbeebeeeeebeebbeebe:
queryA 226:HMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFT: 325
:****************************************************************************************************:
5e6r_A_1 201:HMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFT: 300
SecStr : B HHHHHHHHHHHTS GGGT TTSEEEEEEEESS SS GGGTTSEEEEEEESGGG SHHHHGGGGGGS S HHHHEEEESSTTHHHHTHH:
ExpBur :beeeebbbbebbeebbeebbeeeeebbeebbebbbbbbbbeeeeeeebeebeebbbbbbbbbeebeeeebbeebeebbbebbeebbbebeebeebeebee:
queryA 326:ELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAP: 425
:****** *************************************************************************************:
5e6r_A_1 301:ELQKKIXXXXXXXXXDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAP: 400
SecStr :HHHH --------- SS SSTT EEEEEEEETTEEEEEETTHHHHTB EEEE TTSS EEEE SS GGGTT BTSEEEEE BSSS EEEEEET:
ExpBur :ebbebb---------eeeebebbbbbbbebbebbeeebbbbbbbbebebbbbbbbeeebebbeebbbeeeeeebeebebbebbbbbebeeeebbbbbbbb:
Contact : b b b b b b b b
queryA 426:RYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAI: 525
:****************************************************************************************************:
5e6r_A_1 401:RYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAI: 500
SecStr :TGGGT EEEEEE TT EEEEEEE STTS TTSEEEEE SS SSB EEEEE TT TTB EEEEEE SSSEEEEEEE SSBTTS TTSEE:
ExpBur :ebeeebbbbbbebeeeeeebeeeeebebeeeebebbbebbebbbeeeebbbbbbbbbbebeeeebbbbbbbbebeeeebeeeeebebeeebeebebbebb:
Contact :b bb bbb b b b b b
queryA 526:TALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPV: 615
:******************************************************************************************:
5e6r_A_1 501:TALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPV: 590
SecStr :EE SSSSSS EEEEETTSTTBEEEEE B SSSB SS SEEEEHHHH TT SBTSSEEEE SSSSSS EEEEEETTEEEEEEB :
ExpBur :bebeebbeeebbbbbbbbbebeebbbbbbbbeeebbeeeeebebebeebeeebeebbbbbebeebeeeeeebbbbbbbebebbbbebeee:
Contact : b
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[assembly_id:1]
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