[pdbjlvh2]Protein Model on 3ppy_A

Protein Model on 3ppy_A_1 (TEMPLATE: 3ppy )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description
1	a	A(ITAL_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [187 aa]	von Willebrand factor :VWF_HUMAN

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3ppy_A_1 identity=26.5%

queryA       155:VDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLS--NTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVKHMLL----LTNTFGAINYVATEVFREE: 248
                : *  *   **       *     **  *         *      * *     *  **      *    *  *          ***  *  *     *   :
3ppy_A_1      11:LDVAFVLEGSDKIGEADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEYPFSEAQSKGD---ILQRVREIRYQGGNRTNTGLALRYLSDHSFLVS: 107
SecStr          :EEEEEEEE BTTT HHHHHHHHHHHHHHHHHB BSTTSEEEEEEEESSSEEEEE TTS   HHH---HHHHHHH     BS   HHHHHHHHHHTTT GG:    
ExpBur          :bbbbbbbbbbeebeeeebeebbebbeebbeebebbeebbbbbbbbbbeebeebbbbeeebeeee---bbeebeebeeeebeebbbbebbeebeeebbeee:    

queryA       249:LGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKE: 294
                : ***  *       *   * *        **    ** *      *:
3ppy_A_1     108:QGAREQAPALVYMVTGNPASDEIK-RLPGDIQVVPIGVGPNANVQE: 152
SecStr          :GT  SSS EEEEEEE S  SS   -   TTEEEEEEEESTT  HHH:    
ExpBur          :eebbeebebbbbbbbbbebeeeee-ebeeebebbbbbbeeebeeee:

Protein Model on 3ppy_A_1 (TEMPLATE: 3ppy )

Input Residue Numbers for Focused Sites