Protein Model on 3k71_C_1_A_1
(TEMPLATE: 
3k71
)Protein Model on 3k71_C_1_A_1
(TEMPLATE: 3k71
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [884 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [880 aa] | Integrin alpha-X :ITAX_HUMAN | 635E 639S(Q) 773E(A) 774D 775K(H) 776K(I) 778E(Q) 779A(D) 780N 790S(L) 791R(K) 792A(S) 808S(W) 890D 891S(R) 910D(R) 911N(T) 912S 914T 915T 916I(F) 917I(L) 918P 920L(K) 963D(N) 965N(W) 969L(Q) 993E(A) 994P 995P 1013C(S) 1054S(V) 1056S(E) 1058S(T) 1060N(D) 1061S(T) 1062S 1063K(V) (identity: 28.9 %/37.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3k71_C_1 identity=37.7% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * :
3k71_C_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : B SSS EEE SS-- SSEEEE STTEEEEE TT TTT EEEEETTTTEEEE TTS S TTSEEEEETTTTEEEEEETT EE S:
ExpBur :bbbbeeeebebeeebeb--bbebbbbbbeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbbbebebe:
queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
: * ** *** * :
3k71_C_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr :S EE EEEEE----------------------------------------------------------------------------------------:
ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------:
queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
: :
3k71_C_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342
: :
3k71_C_1 111:----------------------GPTQLTQRLPVSRQECPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188
SecStr :----------------------SSS EE S S -------------------------------------------------------------:
ExpBur :----------------------eeeeeeeebeeeeeeee-------------------------------------------------------------:
queryA -1:----------------------------------------------------------------------------------------------------: -1
: :
3k71_C_1 189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405
: ** * * ** * **** * ** *** * ***:
3k71_C_1 289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387
SecStr :------------------------------------- SSSB TTSSB TT EEEES STTTTBEEEE SSS- B SS S BT:
ExpBur :-------------------------------------eeeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebebb:
queryA 406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI----YQRRQ: 501
:* * * * ******* * * * * ********* ** **** ** * * ***** * *** * * :
3k71_C_1 388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484
SecStr :SS-EE SSS EEEEEETTGGGT EEEEEE-- TTT EEEEE SSTTS TTS EEEE SSSSSS EEEEE SS SS B EEEEE SSTT :
ExpBur :eb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebeeeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbeeeeee:
queryA 502:LGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLAD: 598
: * * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** *:
3k71_C_1 485:WWCDAV--LYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVD: 582
SecStr : S SS-- S SS BTSEEEEEE SSSSS EEEEE TTTTTS BEEEEEB SSS B SS SB BTTSS S SSEEEEEEEEE S SSS E:
ExpBur :bebebe--bebeeeeeebebbebbbebbebbbeeebbbbbbbbbbeeeebbbbbbbbeeeeebeeeeebebbbeeeeeebeebbbbbebebebbeeebbb:
queryA 599:VAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-L: 695
: **** * * *** * * ***** ** * ** * * * * * ** * * * *:
3k71_C_1 583:LAVGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSL: 681
SecStr :EEEEESS EEEEEB B EEEEEEESS S STTSS SSS - EEEEEEEEEEE TTT SSTTTS EEEEEEEEESTTSSS EETTT SSEE:
ExpBur :bbbbbeebbbbbbbbbbbebbeeeebeeeebeeebbeeeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeeb:
Contact : b b
queryA 696:RRNIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPA: 788
: * * * * ** * ** *** * ** *** * * ******* * * ** *** :
3k71_C_1 682:SRVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFP: 769
SecStr :EEEEEE SS EEEEEEEE S S SS EEEEEEE ------------ SSTTS B SS EEEEEE SSS EEEE S:
ExpBur :eeeeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebbbeeeeeeeeebebbbeebbeeeeeeeeebbbebebe:
Contact : bbbb bbb
queryA 789:RSRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVN: 885
: * * * * ** * * *** * * * * * * ** ** * * :
3k71_C_1 770:GLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPK: 868
SecStr :S S EESS EEEEEEEE SS BSS EEEEEEETTEEEE SS S EEEEEE SSS-SEEEEEEE TTS B TT EEEEEEEEE TT:
ExpBur :eeeebbbeeeeebebebebebeeeebebbebbbebbebbebeeeeeeeeeeeebebebeeeeeeeeee-eeeebebebeeeebeeeeeeebebbbebeee:
Contact : bbb b
queryA 886:SSWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV-: 972
: ** * *** * * ** * * * * * * * * * *** * * * *** :
3k71_C_1 869:AVLGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVW: 964
SecStr : SEEEEEEEEEBTTB ---- SSS EEEE EEEE EEEEE S S SS EEEEEEEEE SSS EEEEEE STT SB:
ExpBur :bebeeebebbbebebbbee----eeeeeeeeeeeeebebbbebbbeeeeeebebeeeebeeeeeeeebebebebebebeeebebbbbbbbbbebeeeebb:
Contact : bb bbb bbbbbbbb b b b b
queryA 973:--VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKH:1064
: * * * * * ** * * * *** * * * * * * * * * * * :
3k71_C_1 965:MDVEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVY:1060
SecStr : S EEE T--TS EEEEEE HHHHHHH -EE TTTS EEEEEEEES TT EEEEEE B SGGGTTTT SS -EEEEEEEEE TTTE:
ExpBur :eebeeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbebbebebebeebebeeebbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeee:
Contact : bbb b b b b bbbb
queryA 1065:FHLYGSNA:1072
: * * *:
3k71_C_1 1061:SQLPGQEA:1068
SecStr :EESSS G:
ExpBur :bbeeeeee:
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[assembly_id:5]
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