Protein Model on 3k6s_E_1_F_1
(TEMPLATE: 
3k6s
)Protein Model on 3k6s_E_1_F_1
(TEMPLATE: 3k6s
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [884 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | F 1 (F) | polymer(polypeptide(L)) [674 aa] | Integrin beta-2 :ITB2_HUMAN | 47Y(D) 62G(Q) 97M(L) 114G(T) 116S(H) 120D(G) 121Q(R) 122N 123T(M) 125L 349L(M) 351S(Q) 354I(F) 373W 401A(D) 403Y 406Y 426R 429H 455Q 456I 457G 459Y 484L(H) 486Y 490R 502L(R) 503G(R) 507V(D) 518L(W) 520R 580W(Y) 680H(G) 681R 722I(V) 723S(T) 728S(R) 830R 831K(Y) 832V 836K(Q) 843V(L) 865S(H) 867I 869K(R) 924N(Y) 926L(V) 928Q(S) 931E 935L(K) 936Y 937V(L) 1071N(E) (identity: 37.7 %/37.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3k6s_E_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * :
3k6s_E_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : B SSS EEE SS-- SSEEEE STTEEEEE TT TTT EEEEETTTTEEEE SSS S TTSEEEEETTTTEEEEEETT EE S:
ExpBur :bbbbeeeebebeeebeb--bbebbbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbebebebe:
Contact : b b b b b b
queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
: * ** *** * :
3k6s_E_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr :S EE EEEEE----------------------------------------------------------------------------------------:
ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------:
Contact :bbb b
queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
: :
3k6s_E_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 321:KDLFTELQKKIYVIEGTSKQDLT-----------------------------------------------------------------------------: 343
: :
3k6s_E_1 111:-----------------------GPTQLTQRLPVSRQECPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 187
SecStr :-----------------------SSS B S -----------------------------------------------------------:
ExpBur :-----------------------eeeeeeeebeeeeeeeee-----------------------------------------------------------:
queryA -1:----------------------------------------------------------------------------------------------------: -1
: :
3k6s_E_1 188:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 287
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 344:---------------------------------------SFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYL: 404
: ** * * ** * **** * ** *** * **:
3k6s_E_1 288:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYL: 386
SecStr :--------------------------------------- SSSB TTSSEE TT EEEES STTTTBEEEE SSS- EEE SS S B:
ExpBur :---------------------------------------eeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebeb:
Contact : b b b b b b
queryA 405:GYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQL: 502
:** * * * ******* * * * * ********* ** **** ** * * ***** * *** * * :
3k6s_E_1 387:GYS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWR: 483
SecStr :TSS-EE SSS EEEEEETTGGGT EEEEEE-- TTT EEEEE SSTTS TTS EEEE SSSSSS EEEEE SS SS B EEEEE SSTT:
ExpBur :beb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebeeeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbeeeee:
Contact : b b b bbb b b b b b
queryA 503:GFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADV: 599
: * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * :
3k6s_E_1 484:RWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDL: 583
SecStr : S SS S SS BTS EEEEE SSSSS EEEEE TTTTTS BEEEEEB SSS B SS SB BTTSS TT SSEEEEEEE S SSS EE:
ExpBur :ebebeeebebeeeeeebebbebbbebeebbbeeebbbbbbbbbbeeeebbbbbbbbeeeebbeeeeebebbbeeebeebeebbbbbebeeebbebebbbb:
Contact :b b b b b
queryA 600:AVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LR: 696
:**** * * *** * * ***** ** * ** * * * * * ** * * * * :
3k6s_E_1 584:AVGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLS: 682
SecStr :EEEESS EEEEEB B EEEEEEESS S STTSS SSS - EEEEEEEEEEE TTT SSTTTS EEEEEEEEESTTSSS EETTT SSEEE:
ExpBur :bbbbeebbbbbbbbbbbebbeebebeeeebeeebbeeeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeebe:
Contact : bb
queryA 697:RNIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPAR: 789
:* * * * ** * ** *** * ** *** * * ******* * * ** *** :
3k6s_E_1 683:RVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPG: 770
SecStr :EEEEE SS EEEEEEEEE S S SS EEEEEEE ------------ SSSSS B SS EEEEE SSS EEEE TT:
ExpBur :eeeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebbbeeeeeeeeebebbbeebbeeeeeeeeebbbebebee:
Contact : bb b b
queryA 790:SRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNS: 886
: * * * * ** * * *** * * * * * * ** ** * * :
3k6s_E_1 771:LKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKA: 869
SecStr : S EESS EEEEEEEE SS BSS EEEEEE TTEEEE SS SS EEEEEE SSS-S EEEEEE TTS B TT EEEEEEEEE TT :
ExpBur :eeebbbeeeeebebebebebeeeebbbbebbbebbebbebeeeeeeeeeeeebeeebebeeeeeeee-eeeebebebeeeebeeeeeeebebbbebeeeb:
Contact : bbb b bb b b b
queryA 887:SWGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV--: 972
: ** * *** * * ** * * * * * * * * * *** * * * *** :
3k6s_E_1 870:VLGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWM: 965
SecStr : SEEEEEEEEEBTTB ---- SSS EEEE EEEE EEEE S S SS EEEEEEEE SSS EEEEEEEE STT SB :
ExpBur :ebeeebebbbebbbbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebebebebeeebebbbbbebbbebeeeebbe:
Contact : b b b b bbb
queryA 973:-VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHF:1065
: * * * * * ** * * * *** * * * * * * * * * * * :
3k6s_E_1 966:DVEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYS:1061
SecStr :S EEE T--TS EEEEEE HHHHHHH -EE TTTS EEEEEEEEEEE TT EEEEEE B SGGGGTTT SSE-EEEEEEEEE TTTEE:
ExpBur :ebeeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbbbbebebebeebebeeebbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeeb:
queryA 1066:HLYGSNA:1072
: * * *:
3k6s_E_1 1062:QLPGQEA:1068
SecStr :ESSS :
ExpBur :beeeeee:
Contact : b
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[assembly_id:3]
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