Protein Model on 3k6s_C_1_A_1
(TEMPLATE: 
3k6s
)Protein Model on 3k6s_C_1_A_1
(TEMPLATE: 3k6s
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [885 aa] | Integrin alpha-X :ITAX_HUMAN | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [1082 aa] | Integrin alpha-X :ITAX_HUMAN | 631V(R) 635E 637S(R) 773E(A) 774D 775K(H) 776K(I) 778E(Q) 779A(D) 780N 790S(L) 791R(K) 808S(W) 890D 891S(R) 910D(R) 911N(T) 912S 914T 915T 916I(F) 917I(L) 918P 920L(K) 963D(N) 965N(W) 969L(Q) 993E(A) 994P 995P 1013C(S) 1054S(V) 1056S(E) 1058S(T) 1059F 1060N(D) 1061S(T) 1062S 1063K(V) (identity: 30.8 %/37.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3k6s_C_1 identity=37.5% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNG-VIVGAPGE---GNSTGSLYQCQSGTGHCLPVTLR-GSNYTSKYLGMTLATDPTDGSILACDPGLSRTCD: 120
: *** * ** ** * * * * **** * ** **** ** * * * ** ** *** * * :
3k6s_C_1 1:FNLDTEELTAFRVDSAG--FGDSVVQYANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECG: 98
SecStr : B SSS EEE SS-- SSEEEE STTEEEEE TT TTT EEEEETTTTEEEE SS S TTSEEEEETTTTEEEEEETT EE S:
ExpBur :ebbbeeeebebeeebeb--bbebbbbbeeeebbbbbbeeeeeeebbbbbbebbeeeeebeeeeeeeeeebeebbbbebbbebeeeeebbbbbbebebebe:
queryA 121:QNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDAL: 220
: * ** *** * :
3k6s_C_1 99:RNMYLTGLCFLL----------------------------------------------------------------------------------------: 110
SecStr :S EE EEEEE----------------------------------------------------------------------------------------:
ExpBur :eeebbbbbbbbb----------------------------------------------------------------------------------------:
queryA 221:LKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKL: 320
: :
3k6s_C_1 -1:----------------------------------------------------------------------------------------------------: -1
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 321:KDLFTELQKKIYVIEGTSKQDL------------------------------------------------------------------------------: 342
: :
3k6s_C_1 111:----------------------GPTQLTQRLPVSRQECPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 188
SecStr :----------------------SSS B S ------------------------------------------------------------:
ExpBur :----------------------eeeeeeeebeeeeeeeee------------------------------------------------------------:
queryA -1:----------------------------------------------------------------------------------------------------: -1
: :
3k6s_C_1 189:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 288
SecStr :----------------------------------------------------------------------------------------------------:
ExpBur :----------------------------------------------------------------------------------------------------:
queryA 343:-------------------------------------TSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLG: 405
: ** * * ** * **** * ** *** * ***:
3k6s_C_1 289:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQENVDMRDSYLG: 387
SecStr :------------------------------------- SSSB TTSSEE TT EEEES STTTTBEEEE SSS- EEE SS S BT:
ExpBur :-------------------------------------eeeeebebbbbebbbbbeeebbbbbbbbeeebbbbbbbbeee-eeeebebeeeeeebeebebb:
queryA 406:YTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFI--YQRRQLG: 503
:* * * * ******* * * * * ********* ** **** ** * * ***** * *** * * :
3k6s_C_1 388:YS-TELALWKGVQSLVLGAPRYQHTGKAVIFT--QVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRR: 484
SecStr :SS-EE SSS EEEEEETTGGGT EEEEEE-- TTT EEEEE SSTTS TTS EEEE SSSSSS EEEEE SS SS B EEEEE SSTT :
ExpBur :eb-bebbeeeeeebbbbbbbebeebbbbbbbb--beeeeeeebbebebeeeebebbbbbbbbbbeeeebbebbbbbbbebeeeeebbbbbbbbbbebeeb:
queryA 504:FEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--GAVYIFNGRHG-GLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVA: 600
: * * * * **** * * * * *** * ** *** ** **** * * * ** **** * * * * ** * ** *** * *:
3k6s_C_1 485:WWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEENRGAVYLFHGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLA: 584
SecStr : S SS S SS BTS EEEEE SSSSS EEEEE TTTTTS BEEEEEB SSS B SS SB BTTSS TT SSEEEEEEE S SSS EEE:
ExpBur :bebeeebebeeeeeebebbebbbebbebbbeeebbbbbbbbbbeeeebbbbbbbbeebeebeeeeebebbbeeebeebeebbbbbebeeebbeeebbbbb:
queryA 601:VGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGR--LVANLTYTLQLDGHRTRRRGLFPGGRHE-LRR: 697
:*** * * *** * * ***** ** * ** * * * * * ** * * * * *:
3k6s_C_1 585:VGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSE-QTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSR: 683
SecStr :EEESS EEEEEB B EEEEEEESS S STTTB TT SS - EEEEEEEEEEE TTT SSTTTS EEEEEEEEESTTSSS EETTT SSEEEE:
ExpBur :bbbeebbbbbbbbbbbebeeebebeeeebeeebbebeeeeeee-eeebebebbbebeeeebbeeeebbeebebbbebbbbeeeeeebbebeeeeeeebee:
Contact : b b b
queryA 698:NIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPI--LRPSLHSE-----TWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * ** * ** *** * ** *** * * ******* * * ** *** :
3k6s_C_1 684:VRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTL------------VGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGL: 771
SecStr :EEEE SS EEEEEEEEE SB S SS EEEEEEE ------------ SSSSS B SS EEEEE SSS EEEE TT :
ExpBur :eeebbeeeeeeebebbbebeeeebeebbebebebeb------------eeeebeeeebeebebbeeeeeeeebebbbeeebeeeeeeeeebbbebebeee:
Contact : bbbb bbb b
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIP---VSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSS: 887
: * * * * ** * * *** * * * * * * ** ** * * :
3k6s_C_1 772:KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ-GTWSTSCRINHLIFRGGAQITFLATFDVSPKAV: 870
SecStr : S EESS EEEEEEEE SS BSS EEEEEE TTEEEE TT SS EEEEEE SSS-S EEEEEE TTS B TT EEEEEEEEE TT :
ExpBur :eebbbeeeeebebebebebeebebebbebbbebbebbebeeeeeeeeeeeebeeebebeeeeeeee-eeeebebebeeeebeeeeeeebbbbbebeeebe:
Contact :b b
queryA 888:WGDSVELHANVTCNNEDSDLLEDNSATTI---IPILYPINILIQDQEDSTLYVSFTPKGPK-IHQVKHMYQV-----RIQPSIHDHNIP---TLEAV---: 972
: ** * *** * * ** * * * * * * * * * *** * * * *** :
3k6s_C_1 871:LGDRLLLTANVSSENNT----PRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMD: 966
SecStr : SEEEEEEEEEBTTB ---- SSS EEEE EEEE EEEE S S SS EEEEEEEE SSS EEEEEEEE STT SB S:
ExpBur :beeebebbbebebbbee----eeeeeeeeeeeeebebbbebbbeeeeeeeebeeeebeeeeeeeebebebbbebebeeebebbbbbebbbebeeeebbee:
Contact : bb bbb bbbbbbbb b b b b
queryA 973:VGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGAL-FRCPV---VFRQEILVQVIGTLEL--VGEIEASSMFSLCSSLSISFNSSKHFH:1066
:* * * * * ** * * * *** * * * * * * * * * * * :
3k6s_C_1 967:VEVSHP--QNPSLRCSSEKIAPPASDFLAHIQKNP-VLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKV-SVVSVAEITFDTSVYSQ:1062
SecStr : EEE T--TS EEEEEE HHHHHHH -EE TTTS EEEEEEEEEEE TT EEEEEE B SGGGGTTT SSE-EEEEEEEEE TTTEEE:
ExpBur :beeebe--eeeeeeeeeeeeeeeeeeeeeebeeee-ebebebbebbebebebeebebeebbbbbbebebbbbbbeebeeeeb-bbbbbbebebeeeeebb:
Contact : bbb b b b bbbbbb
queryA 1067:LYGSNA:1072
:* * *:
3k6s_C_1 1063:LPGQEA:1068
SecStr :SSS :
ExpBur :eeeeee:
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[assembly_id:5]
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