Protein Model on 1t0p_A_1_B_1 (TEMPLATE: 1t0p )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(ITAL_HUMAN) A 1 (A) polymer(polypeptide(L)) [174 aa] Integrin alpha-L :ITAL_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [86 aa] Intercellular adhesion molecule-3 :ICAM3_HUMAN 164S 165M 166S 228L 229L 230L 231T 232N 266E 267A 268T 269D 288K 289H (identity: 100.0 %/98.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1t0p_A_1 identity=98.3%
queryA       153:GNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGAR: 252
                :************************************************************* **************************************:
1t0p_A_1       2:GNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGAR: 101
SecStr          :  EEEEEEEE BTTS HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSSEEEEE HHHHHHH  HHHHHTT     B   HHHHHHHHHHHTS GGGT  :    
ExpBur          :eebbbbbbbbbbeebeeebbeebbebbbebbeebeeebbebbbbbbbeeeeebbbbeebeeeeebeebbeebebeeeebbbbebbeebbeebbeeeeebb:    
Contact         :           bbb                                                             bbbbb                    

queryA       253:PDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFT: 325
                :*********************************************************** ****** ******:
1t0p_A_1     102:PDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVCILDTFECLKDLFT: 174
SecStr          :TTSEEEEEEEE S  S     GGGTTSEEEEEE STTTTSHHHHHHHTTTS S HHHHEEETTT GGGGGGT :    
ExpBur          :eebeebbbbbbbbbeeeeeebeebeebebbbbbbeeebeeeebeebbeebbbeeeeebbbebeeeebbeebee:    
Contact         :             bbbb                  bb                                                               


Input Residue Numbers for Focused Sites

ex) 2,15,123