Protein Model on 1jv2_A_1_B_1
(TEMPLATE: 
1jv2
)Protein Model on 1jv2_A_1_B_1
(TEMPLATE: 1jv2
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(ITAL_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [927 aa] | INTEGRIN, ALPHA V | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [539 aa] | PLATELET MEMBRANE GLYCOPROTEIN IIIA BETA SUBUNIT | 349L(F) 351S(Q) 354I(F) 373W 403Y 406Y 426R 429H(T) 455Q 456I(M) 457G(A) 459Y 462G(F) 483P 484L 486Y(M) 488E(R) 490R(E) 516Y(F) 520R 583R(Y) 830R(I) 835L(R) 842P(R) 843V(L) 844S 845C (identity: 40.7 %/29.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1jv2_A_1 identity=29.2% |
queryA 340:QDLTSFNMELSSSGISADLSRGHAVV-GAVGAKDWAGGFL-----DLKADLQDDTF---IGNEPLTPEVRA----GYLGYTVTWLP-SRQKTSLLASGAP: 425
:** * * * * * * * * * * * **** * ** *:
1jv2_A_1 145:QDIDADGQGFCQGGFSIDFTKADRVLLGGPGSFYWQGQLISDQVAEIVSKYDPNVYSIKYNNQLATRTAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVP: 244
SecStr :S STTTTTT TTSEEE TTS EEEETTHHHHTBEEEEE HHHHSTT TT S TTEEE GGG S BTSEEEEE SSSSS EEEEEET:
ExpBur :eebeeebbbebbbbebbbbbeeebbbbbbbbbbeebbbbbbbebebbeeeeeeeeeebebeeebebeeeeeeeeebebbebbbbbebeeeeebbbbbbbb:
Contact : b b b b bb b b
queryA 426:RY-QHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGE------QRGGRVFIYQRRQLGFEEVSELQGDPGYPL: 518
:* * * * * * * *** * * ****** * * * * * * * :
1jv2_A_1 245:RAARTLGMVYIYD----GKNMSSLYNFTGEQMAAYFGFSVAATDINGDDYADVF-IGAPLFMDRGSDGKLQEVGQVSVSLQRASGDFQTTKLNGFEVF--: 337
SecStr :THHHHT EEEEEE----TTT EEEEEE SSTTS TTSEEEEE TTSSS EEE-EEETT EEE TTS EEE EEEEEEE TTS EEEE B SSSS--:
ExpBur :ebeeebbbbbbbb----beebeeeeebebeeeebebbbbbbbbbbbeeeebbbb-bbbbebeeebeeeeeeebbbbbbbbbeeebeeeeeebebeeee--:
Contact :b b bbb b b bb b b bbbbb b b
queryA 519:GRFGEAITALTDINGDGLVDVAVGAPL---EEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQW--------FGRSIHGVKDLEGDGLADVAVGA--ES: 605
: *** ** * * ** * * ** * ******* ** *** ** ** ** * * * * * *** :
1jv2_A_1 338:ARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRSTGLNAVPSQILEG-------QWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVD: 430
SecStr :S SBT B S SS SSS BEEETT SGGG EEE EETTEE S S EEE ------- SSS TTSEEE S SSSSS EEEEEETTTT:
ExpBur :bebbbbbbebbbbbeeeeebbbbbbbbbeeeeebbbbbbbbeeebbeeeebbebeb-------eeeeeeeebbbbebbbbeeebbebebbbbbbbbbbbb:
Contact : b bbb b b
queryA 606:QMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQI--KSLIPQFQGRLVANLTYTLQLDGHRTR---RRGLFPGGR---HELRR: 697
: * *** * ** * * * * * * ** ** ** * * :
1jv2_A_1 431:RAILYRARPVITVNAGLEVYPSILNQDNKTCSLPGTALKVSCFNVRFCLKADGKGVLPR-----KLNFQVELLLDKLKQKGAIRRALFLYSRSPSHSKNM: 525
SecStr :EEEEEEB EEEEE EEESS EE TT B SSS B EEEEEEEEEEE SSS S----- B EEEEEE TT TT EESSS SSEEEEE :
ExpBur :bbbbbbbbbbbebeeebebeeeebebeeeeeeeeeeeeebbbbbbebbbebebeeebee-----ebebebebbbbeebeeeeeebbbbbeeeebeeeeeb:
queryA 698:NIAVTTSMSCTDFSFHF--PVCVQDLISPINVSLNFSLWEEEGTPRDQR--AQGKDIPPILR---PSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARS: 790
: * * * * ** * * * * *** * * * **** * * ** :
1jv2_A_1 526:TISRGGLMQCEELIAYLRDESEFRDKLTPITIFMEYRL--------DYRTAADTTGLQPILNQFTPANISRQAHILLD--CGEDNVCKPKLEVSVD-SDQ: 614
SecStr : B STT EEEEEEEE GGG SS EEEEEEEE -------- SS S SSS EE TT SEE EEEE S-- SSSS EEEEE - TT:
ExpBur :ebbeeeeeeeeebbbbbeeeeebebebebbbbbbebeb--------eeebeeeeeebebbeeeeeeeeeeeebbbeee--beeeeebebebbbebe-eee:
queryA 791:RALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGD: 890
: * * * ** * * * * ** * * * * *** * * :
1jv2_A_1 615:KKIYIGDDNPLTLIVKAQNQGEGAYEAELIVSIPLQADFIGV-VRNNEALARLSCAFKTENQ---TRQVVCDLGNPM-KAGTQLLAGLRFSVHQQSEMDT: 709
SecStr : EESSS EEEEEEEEEEE SS BSS EEEEE TT EEEE- SSTTSB EEEESSS--- EEEEEE SSB- SS B EEEEEEE SSSSS:
ExpBur :eebebbeebebebebebbbeeebbbebebbbebbebbeeebb-beeeeeebebebeeeeeee---eebbbbebeeeb-eeeeeeebbbebbbeeebeeee:
Contact : b b bbbb
queryA 891:SVELHANVTCNN: 902
:** *:
1jv2_A_1 710:SVKFDLQIQSSN: 721
SecStr :EEEEEEEEE S :
ExpBur :ebebebebebeb:
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[assembly_id:1]
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