Protein Model on 7qpd_D_1_G_1
(TEMPLATE: 
7qpd
)Protein Model on 7qpd_D_1_G_1
(TEMPLATE: 7qpd
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAA_HUMAN) | D 1 (M) | polymer(polypeptide(L)) [274 aa] | HLA class I histocompatibility antigen, A-3 alpha chain :1A03_HUMAN | |
| 2 | b | G 1 (D) | branched(oligosaccharide) | alpha-D-glucopyranose-(1-3)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 110N (identity: 100.0 %/100.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7qpd_D_1 identity=100.0% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
:****************************************************************************************************:
7qpd_D_1 1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEESSSSS S B SHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTS EEEEEEE:
ExpBur :eebbbebebbbebeeeeeeeebbbbbebbeeebbebbeeeeeebbeeebebbeeeeeebbeebbeebeeeeeebeeebeebbeeeeeeeeeebebebbbb:
Contact : b
queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
:****************************************************************************************************:
7qpd_D_1 101:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHHTTHHHHHHHHHTHHHHHHHHHHHHTTTTSS B EEEEE SSSEEE:
ExpBur :bbbbeeeeeeebbbebbbeeeebbbbeeebeebeeebebbeebbeebeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeebbb:
queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
:**************************************************************************:
7qpd_D_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr :EEEEEEEEBSS EEEEEEETTEE TTT EEEEEEE SSS EEEEEEEEEETT TTSEEEEEEETTSSS B :
ExpBur :bebebebbbeeebebebbbeeeeeeeebeeeeeeeeeeebbebbbbbebeeeeeebbbbebebeebeeeeebee:
|
[assembly_id:1]
[help]