[pdbjlvh2]Protein Model on 7kgp_A_1_C

Protein Model on 7kgp_A_1_C_1 (TEMPLATE: 7kgp )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [278 aa]	MHC class I antigen :Q861F7_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	Nucleoprotein :NCAP_SARS2	29M 31Y 33F 87E 90N(K) 91V 94Q(H) 97T 100V 101D 104T 105L 108Y 123Y 138R(H) 140D(Y) 167T 170K 171W 176E(V) 179Q 180L 183Y 191W 195Y (identity: 80.0 %/92.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7kgp_A_1 identity=92.4%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
7kgp_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbeeebbebbeebeeeebbeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                                     b  bb  b  b  bb  bb  b              b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
7kgp_A_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeebeeeeebeebeeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:    
Contact         :             b b                          b  bb    b  bb  b       b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWELSS: 302
                :****** ************************************* ******* ********************** **:
7kgp_A_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRYTCHVQHEGLPKPLTLRWEPSS: 278
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE   TT :    
ExpBur          :bbbebeebbbbebebebeeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebebeeee:

Protein Model on 7kgp_A_1_C_1 (TEMPLATE: 7kgp )

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