[pdbjlvh2]Protein Model on 6jp3_A_1_C

Protein Model on 6jp3_A_1_C_1 (TEMPLATE: 6jp3 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [274 aa]	HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [5 aa]	ALA-THR-ILE-GLY-THR	29M 31Y 33F(Y) 69M 86Q 87E 90N 123Y 180L(Q) 183Y 187T(R) 191W 195Y (identity: 76.9 %/97.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6jp3_A_1 identity=97.4%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******** ******************************************************************************** **********:
6jp3_A_1       1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebebebbebebbebebeeeeeebeeebebbeebbeebbeebbeebeebbeebeeebeebeeeeeeeeeeebbbebbbb:    
Contact         :    b b b                                   b                bb  b                                b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ********************************************** *** **** * *************************************:
6jp3_A_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeeeeeeebbeeeeeebebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                                                       b  b   b   b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :**************************************************************************:
6jp3_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE  :    
ExpBur          :bebbbebbbbbebebebbeeeeeeeeeeeebeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee:

Protein Model on 6jp3_A_1_C_1 (TEMPLATE: 6jp3 )

Input Residue Numbers for Focused Sites