Protein Model on 5gsd_A_1_C_1
(TEMPLATE: 
5gsd
)Protein Model on 5gsd_A_1_C_1
(TEMPLATE: 5gsd
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(HLAA_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [274 aa] | HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [7 aa] | Epstein Barr Virus, Latent membrane protein-2 epitope | 31Y 33F(Y) 87E 90N 93A 94Q 97T 101D 108Y 119I 123Y 140D 167T 170K 171W 179Q 180L(Q) 183Y (identity: 88.9 %/97.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5gsd_A_1 identity=97.4% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
:******** ******************************************************************************** **********:
5gsd_A_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TTS EEEEEEE:
ExpBur :eebbbbbebebebbeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebebb:
Contact : b b b b bb b b b b b
queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
:**** ********************************************** *** **** * *************************************:
5gsd_A_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE:
ExpBur :bbbbeebebeebebebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:
Contact : b b bb bb b
queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
:**************************************************************************:
5gsd_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE :
ExpBur :bbbbbebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee:
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[assembly_id:1]
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