[pdbjlvh2]Protein Model on 5c09_F_1_O

Protein Model on 5c09_F_1_O_1 (TEMPLATE: 5c09 )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	F 1 (F)	polymer(polypeptide(L)) [276 aa]	HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN
2	b		O 1 (F)	non-polymer(SO4)	SULFATE ION	228W 230L 258R 266Q (identity: 100.0 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5c09_F_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
5c09_F_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE STTGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebeeeebbebbbeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebbbb:    

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
5c09_F_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS     EEEEEEEEEETTEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
5c09_F_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEESSS  EEEEEETTEEE TT EE   EE SSS EEEEEEEEEETTGGGGEEEEEE TTSSS EEE   :    
ExpBur          :bebbbeebbebebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeeeeeeeebeee:    
Contact         :   b b                           b       b

Protein Model on 5c09_F_1_O_1 (TEMPLATE: 5c09 )

Input Residue Numbers for Focused Sites