[pdbjlvh2]Protein Model on 4nqv_A_1_M

Protein Model on 4nqv_A_1_M_1 (TEMPLATE: 4nqv )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [274 aa]	HLA class I histocompatibility antigen, A-1 alpha chain :1A01_HUMAN
2	b		M 1 (M)	polymer(polypeptide(L)) [9 aa]	Nucleoprotein	29M 31Y 33F 86Q 87E 90N 91V(M) 94Q(H) 97T 98D 101D(N) 104T 105L 108Y 119I 121I 123Y 138R 140D 147Y 167T 170K 171W 180L(R) 183Y 187T(R) 195Y (identity: 81.5 %/94.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4nqv_A_1 identity=94.5%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******************************************* ********************** ** *****  ************ **********:
4nqv_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEESSSSS S EE STTGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeeeebebebebeebebbebbeeeeeeebbeebebbeebeeebbeebbeebeeeeeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                                    bb  bb  b  bb  b  bb  b          b b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ******************************************** * *** * ** * **  *********************************:
4nqv_A_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAVHAAEQRRVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHTTHHHHHHHHHHHHTHHHHS  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebbeeeeeeebbeeebebbeeebbebbeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :             b b      b                   b  bb        b  b   b       b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :**************************************************************************:
4nqv_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE :    
ExpBur          :bebbbebbbbbebebebbeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebebbeeeeebee:

Protein Model on 4nqv_A_1_M_1 (TEMPLATE: 4nqv )

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