[pdbjlvh2]Protein Model on 3qdm_A_1_D

Protein Model on 3qdm_A_1_D_1 (TEMPLATE: 3qdm )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN
2	b		D 1 (D)	polymer(polypeptide(L)) [195 aa]	DMF4 alpha chain	89R 90N(K) 93A 178E 179Q 182A 187T 191W (identity: 87.5 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3qdm_A_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
3qdm_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTS S EEEEEEEETTEEEEEEETTSTT S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeeeebebebebbebebbebebeeeeeebeeebebbeebeeebbebbbeebeeeeeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :                                                                bb  b                               

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
3qdm_A_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEE STTHHHHHHHHHHTTHHHHHHHHHTTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbbbeeebeebeeeeebbeebeeebeeeeebeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :                                                     bb  b    b   b                                 

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
3qdm_A_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS EEEEEEETTEE  TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEEETT SS EEE   :    
ExpBur          :bebbbeebbbeebebebeeeeeeeeeeeeeeebeeeeeebbebbbbbebeeeebeebbbebebeebeeeeeeeee:

Protein Model on 3qdm_A_1_D_1 (TEMPLATE: 3qdm )

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