Protein Model on 1w72_A_1_C_1 (TEMPLATE: 1w72 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAA_HUMAN) A 1 (A) polymer(polypeptide(L)) [274 aa] HLA CLASS I HISTOCOMPATIBILITY ANTIGEN :1A01_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [9 aa] MELANOMA-ASSOCIATED ANTIGEN 1 :MAG1_HUMAN 29M 31Y 83Y 86Q 87E 90N 91V(M) 97T 101D(N) 104T 105L 108Y 119I 121I 123Y 138R 140D 167T 170K 171W 176E(A) 179Q 180L(R) 183Y 187T(R) 194R 195Y (identity: 81.5 %/94.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1w72_A_1 identity=94.5%
queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :******************************************* ********************** ** *****  ************ **********:
1w72_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQKMEPRAPWIEQEGPEYWDQETRNMKAHSQTDRANLGTLRGYYNQSEDGSHTIQIMYG: 100
SecStr          :  EEEEEEEEEEEETTTEEEEEEEEEEETTEEEEEEETTSS  S EESSGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebbbebeebebbebbeeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :    b b                                                   b  bb  bb     b   b  bb  b          b b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :**** ******************************************** * *** * ** * **  *********************************:
1w72_A_1     101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAVHAAEQRRVYLEGRCVDGLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200
SecStr          :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeebbeeebeebeeebbebbeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :             b b                          b  bb    b  bb  b   b      bb                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298
                :**************************************************************************:
1w72_A_1     201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274
SecStr          :EEEEEEEEBSS  EEEEEETTEE  SSEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE :    
ExpBur          :bbbbbeebbbbebebbbeeeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123