[pdbjlvh2]Protein Model on 1p7q_A_1_D

Protein Model on 1p7q_A_1_D_1 (TEMPLATE: 1p7q )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

[sequence-replaced 3D model] [for PyMOL]

[3D template]

[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [276 aa]	HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN
2	b		D 1 (D)	polymer(polypeptide(L)) [183 aa]	leukocyte immunoglobulin-like receptor 1 :LIRB1_HUMAN	217P(A) 218I(V) 219S 220D 222E 272V (identity: 66.7 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1p7q_A_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
1p7q_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEETTSS  S EE SHHHHT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebbbebbebebbebbbebeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebbeeeeeeeeeebebebebb:    

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
1p7q_A_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEESSSEEEEE TTSS EE  SGGGHHHHHHHHHHTHHHHTHHHHHTHHHHHHHHHHHHTHHHHS  B  B  EEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebbbebbbeeeebbebeeebebbebeeeebeebbeebeeeebbeebeeebebebbeebeebbeebeeebeeeeebeeeeeeeeeeeeebb:    
Contact         :                                                                                            bbbb b  

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
1p7q_A_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEE  BSBBSS  EEEEBTTS B  SSSEE   EE SSS EE  EEEEEETT GGG EEEEE TT SS EEEES :    
ExpBur          :bbbbbbebbbbebebebbeeeeeeeeebeeeeeeeeeeebbbbbbbbebeeeebeebbbebebebbeeeeebeee:    
Contact         :                                               b

Protein Model on 1p7q_A_1_D_1 (TEMPLATE: 1p7q )

Input Residue Numbers for Focused Sites