[pdbjlvh2]Protein Model on 1duy_A_1_C

Protein Model on 1duy_A_1_C_1 (TEMPLATE: 1duy )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA-A2*0201 :1A02_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [8 aa]	HTLV-1 OCTAMERIC TAX PEPTIDE	31Y 33F 69M 87E 90N(K) 91V 94Q(H) 97T 100V 101D 104T 108Y 121I(R) 123Y 140D(Y) 167T 170K 171W 179Q 180L 183Y (identity: 81.0 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1duy_A_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
1duy_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  TTSSS EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SS   EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeebebebebebbebebbebeeeeeeeebeeebebbeebeeebbebbbeebeebbeebeeebeebeeeeeeeeeeebebebbbb:    
Contact         :      b b                                   b                 b  bb  b  b  bb  b   b            b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
1duy_A_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TT SEEEEEEEEEETTEEEEEE TTSSSEEE SSHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebebebbbeeeebbbbeeebeebeeebebbeebeeebeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb:    
Contact         :               b                          b  bb       bb  b                                         

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
1duy_A_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGG EE   EE SSS EEEEEEEEEETT GGGEEEEEE TTSSS EEEE  :    
ExpBur          :bebbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebeee:

Protein Model on 1duy_A_1_C_1 (TEMPLATE: 1duy )

Input Residue Numbers for Focused Sites