[pdbjlvh2]Protein Model on 1bd2_A_1_C

Protein Model on 1bd2_A_1_C_1 (TEMPLATE: 1bd2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [275 aa]	HLA-A 0201 :1A02_HUMAN
2	b		C 1 (C)	polymer(polypeptide(L)) [9 aa]	TAX PEPTIDE	29M 31Y 33F 69M 87E 90N(K) 94Q(H) 96Q 97T 100V 101D 104T 105L 108Y 121I(R) 123Y 140D(Y) 167T 170K 171W 176E(V) 179Q 180L 183Y 191W 195Y (identity: 80.8 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1bd2_A_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
1bd2_A_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEEEETTTEEEEEEEEEEETTEEEEEEETTSSS S EE STTTTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT  SS   EEEEEEE:    
ExpBur          :eebebbbebebebeeeeeeeebebbbebeebebbebbeeeeeeebeeebebbeeeeeebbebbbeebeebeeebeebbeebeeeeeeeeeeebebebbbb:    
Contact         :    b b b                                   b                 b  b   b bb  bb  bb  b            b b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
1bd2_A_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEE SSSSEEE:    
ExpBur          :bbbbeeeeeeebebebbbeeeebbbbeeebeebeeeeebbeebeeebeeeeebeebeeebeeebbeebebbbeebeeebeeeeebeeebeebeeeeeebe:    
Contact         :               b                          b  bb    b  bb  b       b   b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
1bd2_A_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEE GGGEEE   EE SSS EEEEEEEEEETTGGGGEEEEEE TT SS EEEE  :    
ExpBur          :bebbbeebbebebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebebbebbbebeebeeeeebbee:

Protein Model on 1bd2_A_1_C_1 (TEMPLATE: 1bd2 )

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