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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NUP98_HUMAN) | J 1 (n) | polymer(polypeptide(L)) [599 aa] | NUP145 isoform 1 :A0A8H4C085_YEASX | |
2 | b | B 1 (b) | polymer(polypeptide(L)) [647 aa] | Nucleoporin NUP85 :NUP85_YEAST | 1323S(R) (identity: 0.0 %/24.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8tie_J_1 identity=24.9% |
queryA 1301:ERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQS--VRELLTMQLVDWHQLQADSFIQDERLRI:1398 :** * * *** * * ** * ** * * * * ** * * ** * * *: 8tie_J_1 869:ERHCRLTSWIVSQIGPEIEEKIR--NSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLIS-YLGSNDPRIRDLAELQLQKWST--GGCSIDKNISKI: 963 SecStr :HHHHHHHHHHHHHHHHHHHHHHH--H HHHHHHHHHHH HHHHHHHHHTT SSHHHHHH-HSS HHHHHHHHHHHHHHHH--H S HHHHHH: ExpBur :ebbeebbebbeeebbeebeeebe--ebeeebeebbbbbbbeebeebeebbeeeeeeebeebbe-ebeebeeebbeebeeebeebee--eeeeeeebbebb: Contact : b queryA 1399:FALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKL:1498 : ** * * * * * * * * * * * * * * * **: 8tie_J_1 964:YKLLSGSPFEGLFSLKELE--SEFSWLCLLNLTLCYGQIDEYSLESLVQSHLDKFSLPYDD------PIGVIFQ----LYAANENTE-----------KL:1040 SecStr :HHHHHT SSSSSS TTT--TTS HHHHHHHHHHSS TTTTTHHHHHHHHHTTS SSS------TTHHHHH----HHHS TTHH-----------HH: ExpBur :bbbbbbbbbbeeeebeebe--eebeebbbbbbbbebeebeeeebbebbeebbeebebebee------eebbbbb----bbbbeeebe-----------eb: queryA 1499:YSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPES:1598 :* * * * ** * * ** * * *** * ** * * * ** : 8tie_J_1 1041:YK----------EVRQRT-NALDVQFCWYLIQTLRFNGTRVFSKETSDEATFAFAAQLEFAQLHGHSLFVSCFLNDDKAAEDTIKRLVMREITLLRA---:1126 SecStr :HH----------HHTTS - SSHHHHHHHHHTTTTSS HHHHHHHHHHHHHHHHHT SSTTHHHHH S TTTHHHHHHHHHHH SSSSSS---: ExpBur :be----------ebeeee-beebebbbbbbbbbbbbeeebebeeebbbebbeebbebbbeeeeebbbbbbbbbbeeeebbeebbeebbeebbebbee---: queryA 1599:WAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLIIRH------LASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLV:1692 : * * * * * * * * * * * * * ** * * *: 8tie_J_1 1127:-STNDHILNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPVQNNELKTLREILNEFPDSERDK----WSVSINV:1221 SecStr :-SSHHHHHHTSS HHHHHHHHHHHHHHHT HHHHHHHHHHTT HHHHHHHHHHTHHHHHHHS TTT HHHHHHHHHHHHS HHHHTT---- SSHHH: ExpBur :-eebbeebbebebbeebbeebebeebeeeeeeeebbebbbebebeeebbebbbeebbbebbeeeeeeeeebbeebbebbeebeeebeee----beebbeb: queryA 1693:YLDYIRVI:1700 : * : 8tie_J_1 1222:FEVYLKLV:1229 SecStr :HHHHHHHH: ExpBur :bbbbbebb: |